Evidence map›Paper›PMID 37964750›Full record

ArticleMolecular genetics & genomic medicine2023

Studying carrier frequency of spinal muscular atrophy in the State of Qatar and comparison to other ethnic groups: Pilot study.

Faisal Ibrahim, Dinesh Velayutham, Mohamed Alsharshani, Usama AlAlami, Manar AlDewik, Tala Abuarja, Hilal Al Rifai, Nader I Al-Dewik

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Faisal IbrahimDiagnostic Genetics Division (DGD), Department of Laboratory Medicine and Pathology (DLMP), Hamad Medical Corporation (HMC), Doha, Qatar.ORCID 0009-0004-0431-5744
Dinesh VelayuthamLiberal Arts and Science, Hamad Bin Khalifa University (HBKU), Doha, Qatar.
Mohamed AlsharshaniDiagnostic Genetics Division (DGD), Department of Laboratory Medicine and Pathology (DLMP), Hamad Medical Corporation (HMC), Doha, Qatar.
Usama AlAlamiSchool of Life Science, Manipal Academy of Higher Education (MAHE), Dubai, UAE.
Manar AlDewikDepartment of Research and Translational and Precision Medicine Research Lab, Women's Wellness and Research Center, Hamad Medical Corporation, Doha, Qatar.
Tala AbuarjaDepartment of Research and Translational and Precision Medicine Research Lab, Women's Wellness and Research Center, Hamad Medical Corporation, Doha, Qatar.ORCID 0009-0003-4883-2543
Hilal Al RifaiDepartment of Pediatrics and Neonatology, Neonatal Intensive Care Unit, Newborn Screening Unit, Women's Wellness and Research Center, Hamad Medical Corporation, Doha, Qatar.
Nader I Al-DewikDepartment of Research and Translational and Precision Medicine Research Lab, Women's Wellness and Research Center, Hamad Medical Corporation, Doha, Qatar.ORCID 0000-0001-5739-1135
Hamad Medical Corporation · QAHamad bin Khalifa University · QAManipal Academy of Higher Education · IN

Funding

Qatar National Library
6 · The paper itself

Abstract

backgroundSpinal muscular atrophy (SMA) is an autosomal recessive disease caused by mutations and deletions in SMN1 at exon 7. The carrier frequency for SMN1 mutations ranges from 2 to 4% in the general population.

methodsWe examined allelic, genotypic relatedness and copy number (CN) variations and frequencies of SMN1 and SMN2, in 13,426 samples from Qatar biobank (QBB) to provide a precise estimation of SMA carrier frequency in Qatar in comparison to other populations.

resultsThe SMA carrier frequency was found to be (2.8%) and the rs143838139 was found in 491/13426 (3.66%) of individuals. The SNP rs121909192, which is a pathogenic risk factor, was found in 321/13500 (2.38%). In Addition 242/11379 (2.13%) had two copies of SMN1 and the rs143838139, which may explain the (2 + 0) silent carrier. Additionally, two participants were found to be SMA type 4 with 0 and 4 copy numbers in SMN1 and SMN2, respectively.

conclusionThe SMA carrier frequency in Qatar was found to be comparable to Saudi Arabia and Caucasians. The likely pathogenic variant, rs121909192, was found to be significantly higher when compering with other in our study. The rs143838139 variant, which has a strong association with the silent carrier genotype, has been found. Consequently, testing for this SNP may enhance the precision of evaluating the likelihood of a patient having an affected child. We conclude that the frequency of SMA carriers varies within the Qatar population and other ethnic groups.

Indexed as

EthnicityMuscular Atrophy, SpinalChildHumansPilot ProjectsQatarSurvival of Motor Neuron 1 ProteinSurvival of Motor Neuron 1 Proteincopy number (CN) variationsSMASMN1SMN2SNPs

Identifiers

PMID37964750
PMCPMC10724519
OpenAlexW4388688813

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.