Evidence map›Paper›PMID 37964426›Full record

ArticleMovement disorders : official journal of the Movement Disorder Society2024

Detailed Analysis of ITPR1 Missense Variants Guides Diagnostics and Therapeutic Design.

Jussi Pekka Tolonen, Ricardo Parolin Schnekenberg, Simon McGowan, David Sims, Meriel McEntagart, Frances Elmslie, Debbie Shears, Helen Stewart, George K Tofaris, Tabib Dabir and 39 more

Open access · hybridAbstract read
In one paragraph

Article in Movement disorders : official journal of the Movement Disorder Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Observational
  6. Phenotypic Heterogeneity in Genetic and Acquired Pediatric Cerebellar Disorders.Movement disorders : official journal of the Movement Disorder Society · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

49 authors at 20 institutions in 6 countries.

Jussi Pekka TolonenNuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0002-7350-386X
Ricardo Parolin SchnekenbergNuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0002-3374-8483
Simon McGowanCentre for Computational Biology, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK.
David SimsCentre for Computational Biology, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK.
Meriel McEntagartSouth West Regional Genetics Service, St. George's University Hospitals, London, UK.
Frances ElmslieSouth West Regional Genetics Service, St. George's University Hospitals, London, UK.
Debbie ShearsOxford Center for Genomic Medicine, Oxford University Hospitals National Health Service Foundation Trust, University of Oxford, Oxford, UK.
Helen StewartOxford Center for Genomic Medicine, Oxford University Hospitals National Health Service Foundation Trust, University of Oxford, Oxford, UK.
George K TofarisNuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0002-9252-5933
Tabib DabirNorthern Ireland Regional Genetics Service, Belfast City Hospital, Belfast, UK.
Patrick J MorrisonPatrick G. Johnston Centre for Cancer Research and Cell Biology, Queen's University Belfast, Belfast, UK.
Diana JohnsonSheffield Clinical Genetics Service, Sheffield Children's NHS Foundation Trust, Sheffield, UK.
Marios HadjivassiliouDepartment of Neurology, Royal Hallamshire Hospital, Sheffield Teaching Hospital NHS Foundation Trust, Sheffield, UK.
Sian EllardExeter Genomics Laboratory, Royal Devon University Healthcare NHS Foundation Trust, UK.
Charles Shaw-SmithPeninsula Clinical Genetics Service, Royal Devon University Hospital, Royal Devon University Healthcare NHS Foundation Trust, Exeter, UK.
Anna ZnaczkoPeninsula Clinical Genetics Service, Royal Devon University Hospital, Royal Devon University Healthcare NHS Foundation Trust, Exeter, UK.
Abhijit DixitDepartment of Clinical Genetics, Nottingham University Hospitals NHS Trust, Nottingham, UK.
Mohnish SuriDepartment of Clinical Genetics, Nottingham University Hospitals NHS Trust, Nottingham, UK.
Ajoy SarkarDepartment of Clinical Genetics, Nottingham University Hospitals NHS Trust, Nottingham, UK.
Rachel E HarrisonDepartment of Clinical Genetics, Nottingham University Hospitals NHS Trust, Nottingham, UK.
Gabriela JonesDepartment of Clinical Genetics, Nottingham University Hospitals NHS Trust, Nottingham, UK.
Henry HouldenDepartment of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London, London, UK.ORCID https://orcid.org/0000-0002-2866-7777
Giorgia CeravoloDepartment of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London, London, UK.
Joanna JarvisBirmingham Women's and Children's NHS Foundation Trust, Birmingham, UK.
Jonathan WilliamsOxford Regional Genetics Laboratory, Churchill Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford, UK.
Morag E ShanksOxford Regional Genetics Laboratory, Churchill Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford, UK.
Penny CloustonOxford Regional Genetics Laboratory, Churchill Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford, UK.
Julia RankinDepartment of Clinical Genetics, Royal Devon and Exeter NHS Foundation Trust, Exeter, UK.
Lubov BlumkinSackler School of Medicine, Tel Aviv University, Tel Aviv, Israel.
Tally Lerman-SagieSackler School of Medicine, Tel Aviv University, Tel Aviv, Israel.
Penina PongerSackler School of Medicine, Tel Aviv University, Tel Aviv, Israel.
Salmo RaskinGenetika Centro de Aconselhamento e Laboratório, Curitiba, Brazil.
Katariina GranathResearch Unit of Clinical Medicine, Medical Research Center, Oulu University Hospital and University of Oulu, Oulu, Finland.
Johanna UusimaaResearch Unit of Clinical Medicine, Medical Research Center, Oulu University Hospital and University of Oulu, Oulu, Finland.
Hector ContiAll Wales Medical Genomics Service, Wrexham Maelor Hospital, Wrexham, UK.
Emma McCannLiverpool Women's Hospital Foundation Trust, Liverpool, UK.
Shelagh JossWest of Scotland Centre for Genomic Medicine, Queen Elizabeth University Hospital, Glasgow, UK.
Alexander J M BlakesDivision of Evolution, Infection and Genomics, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.ORCID https://orcid.org/0000-0002-0260-7020
Kay MetcalfeDivision of Evolution, Infection and Genomics, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.
Helen KingstonManchester Centre for Genomic Medicine, University of Manchester, St. Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Marta BertoliNorthern Genetics Service, International Centre for Life, Newcastle upon Tyne, UK.
Rachel KneenDepartment of Neurology, Alder Hey Children's NHS Foundation Trust, Liverpool, UK.
Sally Ann LynchDepartment of Clinical Genetics, Children's Health Ireland (CHI) at Crumlin, Dublin, Ireland.
Inmaculada Martínez AlbaladejoNeurology in Pediatrics, Hospital Santa Lucía, Murcia, Spain.
Austen Peter MooreThe Walton Centre NHS Foundation Trust, Liverpool, UK.
Wendy D JonesNorth East Thames Regional Genetics Service, Great Ormond Street Hospital for Children, Great Ormond Street NHS Foundation Trust, London, UK.
Genomics England Research ConsortiumDepartment of Health & Social Care, London, UK.
Esther B E BeckerNuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0002-5238-4902
Andrea H NémethNuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0002-2941-7657
Nottingham University Hospitals NHS Trust · GBUniversity of Oxford · GBNational Health Service · GBRoyal Devon & Exeter NHS Foundation Trust · GBChurchill Hospital · GBManchester Academic Health Science Centre · GBTel Aviv University · ILOulu University Hospital · FISt George’s University Hospitals NHS Foundation Trust · GBUniversity of Liverpool · GBAlder Hey Children's NHS Foundation Trust · GBBirmingham Women’s and Children’s NHS Foundation Trust · GBCentre for Life · GBChildren's Health Ireland at Crumlin · IEGreat Ormond Street Hospital for Children NHS Foundation Trust · GBQueen Elizabeth University Hospital · GBQueen Mary University of London · GBQueen's University Belfast · GBRoyal Hallamshire Hospital · GBSanta Lucía University General Hospital · ES

Funding

Medical Research Council MR/V007068/1Wellcome Trust
6 · The paper itself

Abstract

backgroundThe ITPR1 gene encodes the inositol 1,4,5-trisphosphate (IP

objectivesWe aimed to identify novel SCA29 and GLSP cases to define core phenotypes, describe the spectrum of missense variation across ITPR1, standardize the ITPR1 variant nomenclature, and investigate disease progression in relation to cerebellar atrophy.

methodsCases were identified using next-generation sequencing through the Deciphering Developmental Disorders study, the 100,000 Genomes project, and clinical collaborations. ITPR1 alternative splicing in the human cerebellum was investigated by quantitative polymerase chain reaction.

resultsWe report the largest, multinational case series of 46 patients with 28 unique ITPR1 missense variants. Variants clustered in functional domains of the protein, especially in the N-terminal IP

conclusionsThis dataset represents the largest cohort of patients with ITPR1 missense variants, expanding the clinical spectrum of SCA29 and GLSP. Standardized transcript annotation is essential for future reporting. Our findings will aid in diagnostic interpretation in the clinic and guide selection of variants for preclinical studies. © 2023 The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.

Indexed as

AniridiaCarbonic AnhydrasesCerebellar AtaxiaIntellectual DisabilityMovement DisordersSpinocerebellar DegenerationsAtrophyHumansInositol 1,4,5-Trisphosphate ReceptorsIntracellular Signaling Peptides and ProteinsMutation, MissenseCA8 protein, humanCarbonic AnhydrasesInositol 1,4,5-Trisphosphate ReceptorsIntracellular Signaling Peptides and ProteinsITPR1 protein, humancerebellumGillespie syndromeIP3R1ITPR1next-generation sequencingspinocerebellar ataxia type 29

Identifiers

PMID37964426
PMCPMC10952845
OpenAlexW4388693158

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.