Evidence map›Paper›PMID 37963867›Full record

ArticleNature communications2023

Single amino acid change alters specificity of the multi-allelic wheat stem rust resistance locus SR9.

Jianping Zhang, Jayaveeramuthu Nirmala, Shisheng Chen, Matthias Jost, Burkhard Steuernagel, Mirka Karafiatova, Tim Hewitt, Hongna Li, Erena Edae, Keshav Sharma and 13 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  3. Role of RyScientific reports · 2025
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  9. Progress and innovations of gene cloning in wheat and its close relatives.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 7 countries.

Jianping Zhang *CSIRO Agriculture & Food, Canberra, ACT, 2601, Australia.ORCID 0000-0003-2488-5723
Jayaveeramuthu Nirmala *Department of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA.
Shisheng Chen *Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agricultural Sciences at Weifang, Weifang, Shandong, 261000, China.ORCID 0000-0002-8617-4356
Matthias Jost *CSIRO Agriculture & Food, Canberra, ACT, 2601, Australia.
Burkhard SteuernagelJohn Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0002-8284-7728
Mirka KarafiatovaInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, 77900, Olomouc, Czech Republic.ORCID 0000-0003-1177-6472
Tim HewittCSIRO Agriculture & Food, Canberra, ACT, 2601, Australia.ORCID 0000-0002-4888-7216
Hongna LiPeking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agricultural Sciences at Weifang, Weifang, Shandong, 261000, China.ORCID 0000-0002-8994-2664
Erena EdaeDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA.
Keshav SharmaUS Department of Agriculture-Agricultural Research Service, Cereal Disease Laboratory, St. Paul, MN, 55108, USA.
Sami HoxhaPlant Breeding Institute, School of Life and Environmental Sciences, University of Sydney, Cobbitty, NSW, 2570, Australia.
Dhara BhattCSIRO Agriculture & Food, Canberra, ACT, 2601, Australia.
Rea Antoniou-KourouniotiSchool of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK.ORCID 0000-0001-5226-521X
Peter DoddsCSIRO Agriculture & Food, Canberra, ACT, 2601, Australia.ORCID 0000-0003-0620-5923
Brande B H WulffPlant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia.ORCID 0000-0003-4044-4346
Jaroslav DolezelInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, 77900, Olomouc, Czech Republic.ORCID 0000-0002-6263-0492
Michael AyliffeCSIRO Agriculture & Food, Canberra, ACT, 2601, Australia.
Colin HiebertAgriculture and Agri-Food Canada, Morden Research and Development Centre, 101 Route 100, Morden, MB, R6M 1Y5, Canada.
Robert McIntoshPlant Breeding Institute, School of Life and Environmental Sciences, University of Sydney, Cobbitty, NSW, 2570, Australia.
Jorge DubcovskyDepartment of Plant Sciences, University of California, Davis, CA, 95616, USA.ORCID 0000-0002-7571-4345
Peng ZhangPlant Breeding Institute, School of Life and Environmental Sciences, University of Sydney, Cobbitty, NSW, 2570, Australia. peng.zhang@sydney.edu.au.ORCID 0000-0002-4191-1068
Matthew N RouseDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA. Matthew.rouse@usda.gov.
Evans LagudahCSIRO Agriculture & Food, Canberra, ACT, 2601, Australia. evans.lagudah@csiro.au.ORCID 0000-0002-6234-1789
Commonwealth Scientific and Industrial Research Organisation · AUThe University of Sydney · AUUniversity of Minnesota · USCzech Academy of Sciences, Institute of Experimental Botany · CZAgricultural Research Service · USAgriculture and Agri-Food Canada · CAHoward Hughes Medical Institute · USJohn Innes Centre · GBKing Abdullah University of Science and Technology · SAUniversity of Glasgow · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most rust resistance genes thus far isolated from wheat have a very limited number of functional alleles. Here, we report the isolation of most of the alleles at wheat stem rust resistance gene locus SR9. The seven previously reported resistance alleles (Sr9a, Sr9b, Sr9d, Sr9e, Sr9f, Sr9g, and Sr9h) are characterised using a synergistic strategy. Loss-of-function mutants and/or transgenic complementation are used to confirm Sr9b, two haplotypes of Sr9e (Sr9e_h1 and Sr9e_h2), Sr9g, and Sr9h. Each allele encodes a highly related nucleotide-binding site leucine-rich repeat (NB-LRR) type immune receptor, containing an unusual long LRR domain, that confers resistance to a unique spectrum of isolates of the wheat stem rust pathogen. The only SR9 protein effective against stem rust pathogen race TTKSK (Ug99), SR9H, differs from SR9B by a single amino acid. SR9B and SR9G resistance proteins are also distinguished by only a single amino acid. The SR9 allelic series found in the B subgenome are orthologs of wheat stem rust resistance gene Sr21 located in the A subgenome with around 85% identity in protein sequences. Together, our results show that functional diversification of allelic variants at the SR9 locus involves single and multiple amino acid changes that recognize isolates of wheat stem rust.

Indexed as

BasidiomycotaDisease ResistanceAllelesAmino Acid SequenceChromosome MappingHaplotypesPlant Diseases

Identifiers

PMID37963867
PMCPMC10645757
OpenAlexW4388655723

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.