Evidence map›Paper›PMID 37963863›Full record

ArticleNature communications2023

Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.

Yeongmok Lee, Hyeon Seong Jeong, Seoyeon Jung, Junmo Hwang, Chi Truc Han Le, Sung-Hoon Jun, Eun Jo Du, KyeongJin Kang, Beom-Gi Kim, Hyun-Ho Lim and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. OPEN STOMATA 1 activates SLAC1 anion channel primarily through CPK15 in ABA-induced stomatal closure inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. ZmGCT1/2 negatively regulate drought tolerance in maize by inhibiting ZmSLAC1 to maintain guard cell turgor.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Mechanistic insights into phosphoactivation of SLAC1 in guard cell signaling.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Yeongmok LeeDepartment of Biological Sciences, Sungkyunkwan University, Suwon, 16419, Republic of Korea.ORCID 0000-0002-7492-1043
Hyeon Seong JeongNeurovascular Unit Research Group, Korea Brain Research Institute, Daegu, 41068, Republic of Korea.
Seoyeon JungDepartment of Biological Sciences, Sungkyunkwan University, Suwon, 16419, Republic of Korea.ORCID 0009-0000-1471-6876
Junmo HwangNeurovascular Unit Research Group, Korea Brain Research Institute, Daegu, 41068, Republic of Korea.
Chi Truc Han LeDepartment of Biological Sciences, Sungkyunkwan University, Suwon, 16419, Republic of Korea.
Sung-Hoon JunElectron Microscopy Research Center, Korea Basic Science Institute, Cheongju, 28119, Republic of Korea.ORCID 0000-0003-0535-1726
Eun Jo DuNeurovascular Unit Research Group, Korea Brain Research Institute, Daegu, 41068, Republic of Korea.
KyeongJin KangNeurovascular Unit Research Group, Korea Brain Research Institute, Daegu, 41068, Republic of Korea.ORCID 0000-0003-0446-469X
Beom-Gi KimMetabolic Engineering Division, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju, 54874, Republic of Korea.
Hyun-Ho LimNeurovascular Unit Research Group, Korea Brain Research Institute, Daegu, 41068, Republic of Korea.
Sangho LeeDepartment of Biological Sciences, Sungkyunkwan University, Suwon, 16419, Republic of Korea. sangholee@skku.edu.ORCID 0000-0003-3886-4579
Sungkyunkwan University · KRKorea Brain Research Institute · KRDaegu Gyeongbuk Institute of Science and Technology · KRKorea Basic Science Institute · KRRural Development Administration · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The anion channel SLAC1 functions as a crucial effector in the ABA signaling, leading to stomata closure. SLAC1 is activated by phosphorylation in its intracellular domains. Both a binding-activation model and an inhibition-release model for activation have been proposed based on only the closed structures of SLAC1, rendering the structure-based activation mechanism controversial. Here we report cryo-EM structures of Arabidopsis SLAC1 WT and its phosphomimetic mutants in open and closed states. Comparison of the open structure with the closed ones reveals the structural basis for opening of the conductance pore. Multiple phosphorylation of an intracellular domain (ICD) causes dissociation of ICD from the transmembrane domain. A conserved, positively-charged sequence motif in the intracellular loop 2 (ICL2) seems to be capable of sensing of the negatively charged phosphorylated ICD. Interactions between ICL2 and ICD drive drastic conformational changes, thereby widening the pore. From our results we propose that SLAC1 operates by a mechanism combining the binding-activation and inhibition-release models.

Indexed as

ArabidopsisArabidopsis ProteinsAbscisic AcidAnionsCryoelectron MicroscopyMembrane ProteinsPlant StomataAbscisic AcidAnionsArabidopsis ProteinsMembrane ProteinsSLAC1 protein, Arabidopsis

Identifiers

PMID37963863
PMCPMC10645844
OpenAlexW4388669654

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.