Evidence map›Paper›PMID 37963010›Full record

ArticleAnnals of botany2023

Hybridization and divergent climatic preferences drive divergence of two allopatric Gentiana species on the Qinghai-Tibet Plateau.

Peng-Cheng Fu, Alex D Twyford, Yu-Tong Hao, Yue Zhang, Shi-Long Chen, Shan-Shan Sun

Open access · greenAbstract read
In one paragraph

Article in Annals of botany, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

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5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Peng-Cheng FuSchool of Life Science, Luoyang Normal University, 6 Jiqing Road, Luoyang 471934, P. R. China.
Alex D TwyfordInstitute of Ecology and Evolution, The University of Edinburgh, Edinburgh, EH9 3FL, UK.ORCID 0000-0002-8746-6617
Yu-Tong HaoSchool of Life Science, Luoyang Normal University, 6 Jiqing Road, Luoyang 471934, P. R. China.
Yue ZhangSchool of Life Science, Luoyang Normal University, 6 Jiqing Road, Luoyang 471934, P. R. China.
Shi-Long ChenKey Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, 810001 Xining, P. R. China.
Shan-Shan SunSchool of Life Science, Luoyang Normal University, 6 Jiqing Road, Luoyang 471934, P. R. China.
Luoyang Normal University · CNChinese Academy of Sciences · CNRoyal Botanic Garden Edinburgh · GB

Funding

National Natural Science Foundation of China 32300190Natural Science Foundation of Henan Province 232300420212
6 · The paper itself

Abstract

BACKGROUND AND

aimsExploring how species diverge is vital for understanding the drivers of speciation. Factors such as geographical separation and ecological selection, hybridization, polyploidization and shifts in mating system are all major mechanisms of plant speciation, but their contributions to divergence are rarely well understood. Here we test these mechanisms in two plant species, Gentiana lhassica and G. hoae, with the goal of understanding recent allopatric species divergence on the Qinghai-Tibet Plateau (QTP).

methodsWe performed Bayesian clustering, phylogenetic analysis and estimates of hybridization using 561 302 nuclear genomic single nucleotide polymorphisms (SNPs). We performed redundancy analysis, and identified and annotated species-specific SNPs (ssSNPs) to explore the association between climatic preference and genetic divergence. We also estimated genome sizes using flow cytometry to test for overlooked polyploidy. KEY

resultsGenomic evidence confirms that G. lhassica and G. hoae are closely related but distinct species, while genome size estimates show divergence occurred without polyploidy. Gentiana hoae has significantly higher average FIS values than G. lhassica. Population clustering based on genomic SNPs shows no signature of recent hybridization, but each species is characterized by a distinct history of hybridization with congeners that has shaped genome-wide variation. Gentiana lhassica has captured the chloroplast and experienced introgression with a divergent gentian species, while G. hoae has experienced recurrent hybridization with related taxa. Species distribution modelling suggested range overlap in the Last Interglacial Period, while redundancy analysis showed that precipitation and temperature are the major climatic differences explaining the separation of the species. The species differ by 2993 ssSNPs, with genome annotation showing missense variants in genes involved in stress resistance.

conclusionsThis study suggests that the distinctiveness of these species on the QTP is driven by a combination of hybridization, geographical isolation, mating system differences and evolution of divergent climatic preferences.

Indexed as

GentianaBayes TheoremDNA, ChloroplastGenetic VariationPhylogenyPlantsPolyploidyTibetDNA, ChloroplastAllopatricclimatic variablesGentianageographical isolationhybridizationspecies pairspecies-specific SNP

Identifiers

PMID37963010
PMCPMC10902892
OpenAlexW4388667386

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.