Evidence map›Paper›PMID 37962679›Full record

ArticleExtremophiles : life under extreme conditions2023

Investigating non-fungal eukaryotic diversity in snow in the Antarctic Peninsula region using DNA metabarcoding.

Paulo E A S Câmara, Graciéle C A de Menezes, Fabyano A C Lopes, Thiago da Silva Paiva, Micheline Carvalho-Silva, Peter Convey, Eduardo T Amorim, Luiz H Rosa

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Article in Extremophiles : life under extreme conditions, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Paulo E A S CâmaraDepartamento de Botânica, Universidade de Brasília, Brasília, 70910-900, Brasil. paducamara@gmail.com.ORCID http://orcid.org/0000-0002-3944-996X
Graciéle C A de MenezesDepartamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, 31270-901, Brasil.
Fabyano A C LopesLaboratório de Microbiologia, Universidade Federal Do Tocantins, Porto Nacional, Brazil.
Thiago da Silva PaivaLaboratório de Protistologia, Instituto de Biologia, Universidade Federal Do Rio de Janeiro, Rio de Janeiro, Brazil.
Micheline Carvalho-SilvaDepartamento de Botânica, Universidade de Brasília, Brasília, 70910-900, Brasil.
Peter ConveyBritish Antarctic Survey, NERC, High Cross, Madingley Road, Cambridge, CB3 0ET, UK.
Eduardo T AmorimCentro Nacional de Conservação da Flora/Instituto de Pesquisas Jardim Botânico Do Rio de Janeiro (CNCFlora/JBRJ), Rio de Janeiro, Brazil.
Luiz H RosaDepartamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, 31270-901, Brasil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Snow is a unique microhabitat, despite being a harsh environment, multiple life forms have adapted to survive in it. While algae, bacteria and fungi are dominant microorganisms in Antarctic snow, little is known about other organisms that may be present in this habitat. We used metabarcoding to investigate DNA sequence diversity of non-fungal eukaryotes present in snow obtained from six different sites across the Maritime Antarctica. A total of 20 taxa were assigned to obtained sequences, representing five Kingdoms (Chromista, Protozoa, Viridiplantae and Metazoa) and four phyla (Ciliophora, Cercozoa, Chlorophyta and Cnidaria). The highest diversity indices were detected in Trinity Peninsula followed by Robert Island, Arctowski Peninsula, Deception Island, King George Island and Snow Island. The most abundant assignments were to Trebouxiophyceae, followed by Chlamydomonas nivalis and Chlamidomonadales. No taxa were detected at all sites. Three potentially new records for Antarctica were detected: two Ciliophora (Aspidisca magna and Stokesia sp.) and the green algae Trebouxia potteri. Our data suggested that similarities found between the sites may be more related with snow physicochemical properties rather than geographic proximity or latitude. This study provides new insights into the diversity and distribution of eukaryotic organisms in Antarctic snow.

Indexed as

ChlamydomonasSnowAntarctic RegionsDNADNA Barcoding, TaxonomicDNABiodiversityChlorophytaHigh-throughput sequencingMicroalgaeSouth Shetland Islands

Identifiers

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.