Evidence map›Paper›PMID 37962568›Full record

ArticleThe Journal of experimental medicine2024

A partial human LCK defect causes a T cell immunodeficiency with intestinal inflammation.

Victor G Lui, Manfred Hoenig, Berenice Cabrera-Martinez, Ryan M Baxter, Josselyn E Garcia-Perez, Olivia Bailey, Atanu Acharya, Karl Lundquist, Jesusa Capera, Paul Matusewicz and 16 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Helper T cell immunity in humans with inherited CD4 deficiency.The Journal of experimental medicine · 2024
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 8 institutions in 5 countries.

Victor G Lui *Department of Immunology and Microbiology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID 0000-0003-1553-1499
Manfred Hoenig *Department of Pediatrics, University Medical Center Ulm, Ulm, Germany.ORCID 0000-0001-9165-1690
Berenice Cabrera-MartinezDepartment of Immunology and Microbiology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID 0009-0000-2919-2729
Ryan M BaxterDepartment of Immunology and Microbiology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID 0000-0002-2235-6193
Josselyn E Garcia-PerezDepartment of Immunology and Microbiology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID 0000-0003-2369-532X
Olivia BaileyDepartment of Immunology and Microbiology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID 0009-0007-5258-9856
Atanu AcharyaSchool of Physics, Georgia Institute of Technology , Atlanta, GA, USA.ORCID 0000-0002-6960-7789
Karl LundquistSchool of Physics, Georgia Institute of Technology , Atlanta, GA, USA.ORCID 0000-0002-3418-8342
Jesusa CaperaNuffield Department of Orthopaedics Rheumatology and Musculoskeletal Sciences, The Kennedy Institute of Rheumatology, University of Oxford, Oxford, UK.ORCID 0000-0002-8123-7725
Paul MatusewiczFaculty of Biology, University of Freiburg , Freiburg, Germany.ORCID 0009-0003-8879-7535
Frederike A HartlFaculty of Biology, University of Freiburg , Freiburg, Germany.ORCID 0000-0003-3538-5214
Marco D'AbramoDepartment of Chemistry, Sapienza University of Rome, Rome, Italy.ORCID 0000-0001-6020-8581
Josephine AlbaDepartment of Biology, Université de Fribourg, Fribourg, Switzerland.ORCID 0000-0002-5467-4751
Eva-Maria JacobsenDepartment of Pediatrics, University Medical Center Ulm, Ulm, Germany.ORCID 0000-0003-4750-0136
Doris NiewolikInstitute for Transfusion Medicine, University of Ulm , Ulm, Germany.ORCID 0000-0001-6055-1451
Myriam LorenzInstitute for Transfusion Medicine, University of Ulm , Ulm, Germany.ORCID 0000-0002-3537-4550
Ulrich PannickeInstitute for Transfusion Medicine, University of Ulm , Ulm, Germany.ORCID 0000-0002-0929-1794
Ansgar S SchulzDepartment of Pediatrics, University Medical Center Ulm, Ulm, Germany.ORCID 0000-0002-7798-7996
Klaus-Michael DebatinDepartment of Pediatrics, University Medical Center Ulm, Ulm, Germany.ORCID 0000-0002-8397-1886
Wolfgang W SchamelFaculty of Biology, University of Freiburg , Freiburg, Germany.ORCID 0000-0003-4496-3100
Susana MinguetFaculty of Biology, University of Freiburg , Freiburg, Germany.ORCID 0000-0001-8211-5538
James C GumbartSchool of Physics, Georgia Institute of Technology , Atlanta, GA, USA.ORCID 0000-0002-1510-7842
Michael L DustinNuffield Department of Orthopaedics Rheumatology and Musculoskeletal Sciences, The Kennedy Institute of Rheumatology, University of Oxford, Oxford, UK.ORCID 0000-0003-4983-6389
John C CambierDepartment of Immunology and Microbiology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID 0000-0002-7803-242X
Klaus Schwarz *Institute for Transfusion Medicine, University of Ulm , Ulm, Germany.ORCID 0000-0003-3178-5990
Elena W Y Hsieh *Department of Immunology and Microbiology, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID 0000-0003-3969-6597
Universität Ulm · DEUniversity of Colorado Anschutz Medical Campus · USUniversity of Freiburg · DEGeorgia Institute of Technology · USNuffield Orthopaedic Centre · GBChildren's Hospital Colorado · USSapienza University of Rome · ITUniversity of Fribourg · CH

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
University of Colorado Anschutz Medical Campus DRCP30DK116073 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LORI SUSSEL · 2020 to 2026
$10.8M
TRAINING PROGRAM IN IMMUNOLOGYT32AI007405 · NIAID · UNIVERSITY OF COLORADO DENVER · PI Laurel L Lenz, Raul Martin Torres · 1991 to 2026
$10.5M
Immune Dysregulation in Pediatric SLE PathogenesisK23AR070897 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI HSIEH, WEN-YUAN E · 2017 to 2021
$850k
Cancer Research Institute CRI4503NCI NIH HHS P30 CA046934NIAID NIH HHS T32 AI007405NIAMS NIH HHS K23 AR070897NIAMS NIH HHS K23AR070897NIDDK NIH HHS P30 DK116073Wellcome TrustWellcome Trust 100262Z/12/Z
6 · The paper itself

Abstract

Lymphocyte-specific protein tyrosine kinase (LCK) is essential for T cell antigen receptor (TCR)-mediated signal transduction. Here, we report two siblings homozygous for a novel LCK variant (c.1318C>T; P440S) characterized by T cell lymphopenia with skewed memory phenotype, infant-onset recurrent infections, failure to thrive, and protracted diarrhea. The patients' T cells show residual TCR signal transduction and proliferation following anti-CD3/CD28 and phytohemagglutinin (PHA) stimulation. We demonstrate in mouse models that complete (Lck-/-) versus partial (LckP440S/P440S) loss-of-function LCK causes disease with differing phenotypes. While both Lck-/- and LckP440S/P440S mice exhibit arrested thymic T cell development and profound T cell lymphopenia, only LckP440S/P440S mice show residual T cell proliferation, cytokine production, and intestinal inflammation. Furthermore, the intestinal disease in the LckP440S/P440S mice is prevented by CD4+ T cell depletion or regulatory T cell transfer. These findings demonstrate that P440S LCK spares sufficient T cell function to allow the maturation of some conventional T cells but not regulatory T cells-leading to intestinal inflammation.

Indexed as

Immunologic Deficiency SyndromesLymphopeniaAnimalsCD28 AntigensCD4-Positive T-LymphocytesHumansInfantInflammationLymphocyte Specific Protein Tyrosine Kinase p56(lck)MiceReceptors, Antigen, T-CellCD28 AntigensLymphocyte Specific Protein Tyrosine Kinase p56(lck)Receptors, Antigen, T-Cell

Identifiers

PMID37962568
PMCPMC10644909
OpenAlexW4388655036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.