Evidence map›Paper›PMID 37962168›Full record

RevieweLife2023

Systems genetics approaches for understanding complex traits with relevance for human disease.

Hooman Allayee, Charles R Farber, Marcus M Seldin, Evan Graehl Williams, David E James, Aldons J Lusis

Abstract readReview
In one paragraph

Review in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Establishing the hybrid rat diversity program: a resource for dissecting complex traits.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Genetics unravels protein-metabolite relationships.Trends in endocrinology and metabolism: TEM · 2024
    Article
  15. Special Issue "Deployment of Proteomics Approaches in Biomedical Research".International journal of molecular sciences · 2024
    Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hooman Allayee *Departments of Population & Public Health Sciences, University of Southern California, Los Angeles, United States.ORCID 0000-0002-2384-5239
Charles R Farber *Center for Public Health Genomics, University of Virginia School of Medicine, Charlottesville, United States.ORCID 0000-0002-6748-4711
Marcus M SeldinDepartment of Biological Chemistry, University of California, Irvine, Irvine, United States.ORCID 0000-0001-8026-4759
Evan Graehl WilliamsLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Luxembourg, Luxembourg.ORCID 0000-0002-9746-376X
David E JamesSchool of Life and Environmental Sciences, University of Sydney, Camperdown, Australia.ORCID 0000-0001-5946-5257
Aldons J LusisDepartments of Human Genetics, University of California, Los Angeles, Los Angeles, United States.ORCID 0000-0001-9013-0228

Funding

Translational Research Support CoreP30ES007048 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ROB S MCCONNELL · 1996 to 2026
$46.4M
Systems Genetics Dissection of Non-alcoholic SteatohepatitisR01DK117850 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Aldons Jake Lusis · 2019 to 2026
$4.6M
A Systems Genetics Approach to Identify BMD GenesR01AR071657 · NIAMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FARBER, CHARLES R, GERSTENFELD, LOUIS CHARLES · 2018 to 2022
$3.9M
Systems Genetics of Bone RegenerationR01AR079179 · NIAMS · UNIVERSITY OF VIRGINIA · PI Charles R Farber, D Rick Sumner · 2022 to 2026
$3.3M
Identification of Novel Genes Impacting Osteoblast ActivityR01AR079839 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI ACKERT-BICKNELL, CHERYL LYNNE, FARBER, CHARLES R · 2021 to 2025
$3.3M
Role of Glycine Metabolism in Cardiovascular DiseaseR01HL133169 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ALLAYEE, HOOMAN · 2017 to 2020
$3.3M
Integrative approaches to dissection of endocrine communicationDP1DK130640 · NIDDK · UNIVERSITY OF CALIFORNIA-IRVINE · PI SELDIN, MARCUS MICHAEL · 2021 to 2025
$3.2M
Informing Osteoporosis GWAS Using NetworksR01AR077992 · NIAMS · UNIVERSITY OF VIRGINIA · PI FARBER, CHARLES R · 2020 to 2025
$2.8M
Gut microbiota and metabolite interactions in atherosclerosisR01HL144651 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE, REY, FEDERICO E · 2019 to 2022
$2.6M
Biological Mechanisms through which TMAO Promotes AtherosclerosisR01HL148110 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ALLAYEE, HOOMAN, SHIH, DIANA MOUHAN · 2020 to 2023
$2.5M
Genetic Predisposition to Myocardial Infarction in Patients with Coronary Artery DiseaseR01HL168493 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Hooman Allayee · 2024 to 2026
$2.2M
Elucidating alcohol-induced metabolic remodeling of critical organsR21AA030358 · NIAAA · UNIVERSITY OF CALIFORNIA-IRVINE · PI JANG, CHOLSOON, SELDIN, MARCUS MICHAEL · 2023 to 2023
$412k
NHLBI NIH HHS R01 HL133169NHLBI NIH HHS R01 HL144651NHLBI NIH HHS R01 HL148110NHLBI NIH HHS R01 HL168493NIAAA NIH HHS R21 AA030358NIAMS NIH HHS R01 AR071657NIAMS NIH HHS R01 AR077992NIAMS NIH HHS R01 AR079179NIAMS NIH HHS R01 AR079839NIDDK NIH HHS DP1 DK130640NIDDK NIH HHS R01 DK117850NIEHS NIH HHS P30 ES007048
6 · The paper itself

Abstract

Quantitative traits are often complex because of the contribution of many loci, with further complexity added by environmental factors. In medical research, systems genetics is a powerful approach for the study of complex traits, as it integrates intermediate phenotypes, such as RNA, protein, and metabolite levels, to understand molecular and physiological phenotypes linking discrete DNA sequence variation to complex clinical and physiological traits. The primary purpose of this review is to describe some of the resources and tools of systems genetics in humans and rodent models, so that researchers in many areas of biology and medicine can make use of the data.

Indexed as

Multifactorial InheritanceSystems BiologyHumansPhenotypecomplex traitscomputational biologygeneticsgenomicshuman populationsmouse modelsomicssystems biologysystems genetics

Identifiers

PMID37962168
PMCPMC10645424

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.