Evidence map›Paper›PMID 37961645›Full record

ArticleResearch square2023

Distinct Intestinal Microbial Signatures Linked to Accelerated Biological Aging in People with HIV.

Shalini Singh, Leila B Giron, Maliha W Shaikh, Shivanjali Shankaran, Phillip A Engen, Zlata R Bogin, Simona A Bambi, Aaron R Goldman, Joao L L C Azevedo, Lorena Orgaz and 13 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 3 countries.

Shalini SinghThe Wistar Institute.
Leila B GironThe Wistar Institute.
Maliha W ShaikhRush University Medical Center.
Shivanjali ShankaranRush University.
Phillip A EngenRush University Medical Center.
Zlata R BoginRush University Medical Center.
Simona A BambiRush University Medical Center.
Aaron R GoldmanThe Wistar Institute.
Joao L L C AzevedoThe Wistar Institute.
Lorena OrgazLife Length (Spain).
Nuria de PedroLife Length (Spain).
Patricia GonzálezLife Length (Spain).
Martin GieraLeiden University Medical Center.
Aswin VerhoevenLeiden University Medical Center.
Elena Sánchez-LópezLeiden University Medical Center.
Ivona Vasile PandreaUniversity of Pittsburgh.
Toshitha KannanThe Wistar Institute.
Ceylan E TanesChildren's Hospital of Philadelphia.
Kyle BittingerChildren's Hospital of Philadelphia.
Alan L LandayRush University.
Michael J CorleyCornell University.
Ali KeshavarzianRush University Medical Center.
Mohamed Abdel-MohsenThe Wistar Institute.
The Wistar Institute · USRush University Medical Center · USLeiden University Medical Center · NLLife Length (Spain) · ESRush University · USUniversity of Pittsburgh · US

Funding

Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI Ronald G Collman · 1999 to 2026
$78.6M
Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Aaron Robert Goldman · 1985 to 2026
$75.9M
Center for Circadian Rhythms and Alcohol-Induced Tissue DamageR24AA026801 · NIAAA · RUSH UNIVERSITY MEDICAL CENTER · PI ALI KESHAVARZIAN · 2019 to 2026
$4.5M
Role of Intestinal Barrier Integrity in Modulating the Host Glycome During COVID-19R01DK123733 · NIDDK · WISTAR INSTITUTE · PI ABDEL MOHSEN, MOHAMED, KESHAVARZIAN, ALI · 2020 to 2024
$4.5M
Host Glycomic Modulation of HIV-associated Neuro-inflammation During Viral SuppressionR01NS117458 · NINDS · WISTAR INSTITUTE · PI ABDEL MOHSEN, MOHAMED, NDHLOVU, LISHOMWA C · 2020 to 2023
$3.4M
Targeting Siglec-9/Sialoglycan Interactions to Enhance NK Functions During HIV InfectionR01AI165079 · NIAID · WISTAR INSTITUTE · PI ABDEL MOHSEN, MOHAMED, XIAO, HAN · 2021 to 2025
$3.1M
Sialic Acid Modulation of HIV-associated Chronic InflammagingR01AG062383 · NIA · WISTAR INSTITUTE · PI ABDEL MOHSEN, MOHAMED · 2019 to 2023
$3.0M
Microbiota-Mediated Bidirectional Interactions Between Alcohol Misuse and Post-COVID-19 SyndromeR01AA029859 · NIAAA · RUSH UNIVERSITY MEDICAL CENTER · PI ABDEL MOHSEN, MOHAMED, KESHAVARZIAN, ALI · 2021 to 2023
$632k
Purchase of a Q Exactive HF mass spectrometer system for metabolomicsS10OD023586 · OD · WISTAR INSTITUTE · PI SPEICHER, DAVID W. · 2017 to 2017
$600k
Single-cell Analysis of Glycomic and Proteomic Features of the HIV ReservoirR21AI170166 · NIAID · WISTAR INSTITUTE · PI ABDEL MOHSEN, MOHAMED, ROAN, NADIA R · 2022 to 2023
$530k
NCI NIH HHS P30 CA010815NIAAA NIH HHS R01 AA029859NIAAA NIH HHS R24 AA026801NIAID NIH HHS P30 AI045008NIAID NIH HHS R01 AI165079NIAID NIH HHS R21 AI170166NIA NIH HHS R01 AG062383NIDDK NIH HHS R01 DK123733NIH HHS S10 OD023586NINDS NIH HHS R01 NS117458
6 · The paper itself

Abstract

Background: People with HIV (PWH), even with controlled viral replication through antiretroviral therapy (ART), experience persistent inflammation. This is partly due to intestinal microbial dysbiosis and translocation. Such ongoing inflammation may lead to the development of non-AIDS-related aging-associated comorbidities. However, there remains uncertainty regarding whether HIV affects the biological age of the intestines and whether microbial dysbiosis and translocation influence the biological aging process in PWH on ART. To fill this knowledge gap, we utilized a systems biology approach, analyzing colon and ileal biopsies, blood samples, and stool specimens from PWH on ART and their matched HIV-negative counterparts. Results: Despite having similar chronological ages, PWH on ART exhibit accelerated biological aging in the colon, ileum, and blood, as measured by various epigenetic aging clocks, compared to HIV-negative controls. Investigating the relationship between microbial translocation and biological aging, PWH on ART had decreased levels of tight junction proteins in the colon and ileum, along with increased microbial translocation. This increased intestinal permeability correlated with faster intestinal and systemic biological aging, as well as increased systemic inflammation. When investigating the relationship between microbial dysbiosis and biological aging, the intestines of PWH on ART had higher abundance of specific pro-inflammatory bacterial genera, such as Conclusions: We identified a specific microbial composition and microbiome-related metabolic pathways that are intertwined with both intestinal and systemic biological aging in PWH on ART. A deeper understanding of the mechanisms underlying these connections could potentially offer strategies to counteract premature aging and its associated health complications in PWH.

Indexed as

aging clocksbiological aginggutHIVintestinesmetabolomemicrobiome

Identifiers

PMID37961645
PMCPMC10635386
OpenAlexW4388016935

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.