Evidence map›Paper›PMID 37961628›Full record

ArticlebioRxiv : the preprint server for biology2023

Comprehensive detection of structural variation and transposable element differences between wild type laboratory lineages of

Zachary D Bush, Alice F S Naftaly, Devin Dinwiddie, Cora Albers, Kenneth J Hillers, Diana E Libuda

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zachary D BushInstitute of Molecular Biology, Department of Biology, University of Oregon, 1229 Franklin Blvd Eugene, OR 97403, USA.
Alice F S NaftalyInstitute of Molecular Biology, Department of Biology, University of Oregon, 1229 Franklin Blvd Eugene, OR 97403, USA.
Devin DinwiddieInstitute of Molecular Biology, Department of Biology, University of Oregon, 1229 Franklin Blvd Eugene, OR 97403, USA.
Cora AlbersInstitute of Molecular Biology, Department of Biology, University of Oregon, 1229 Franklin Blvd Eugene, OR 97403, USA.
Kenneth J HillersBiological Sciences Department, California Polytechnic State University, San Luis Obispo, California, USA.
Diana E LibudaInstitute of Molecular Biology, Department of Biology, University of Oregon, 1229 Franklin Blvd Eugene, OR 97403, USA.ORCID 0000-0002-4944-1814
Oregon Research Institute · USCalifornia Polytechnic State University · US

Funding

DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007348 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe, KRYN STANKUNAS · 1989 to 2026
$6.8M
Recombination pathway and partner choices during meiosis - Admin supplement for purchase of a High Content Imaging System.R35GM128890 · NIGMS · UNIVERSITY OF OREGON · PI Diana Elizabeth Libuda · 2018 to 2026
$4.0M
NICHD NIH HHS T32 HD007348NIGMS NIH HHS R35 GM128890
6 · The paper itself

Abstract

Genomic structural variations (SVs) and transposable elements (TEs) can be significant contributors to genome evolution, altered gene expression, and risk of genetic diseases. Recent advancements in long-read sequencing have greatly improved the quality of

Indexed as

C. elegansgenetic driftgenome stabilityreference genomessequence variationtransposonswhole genome sequencing

Identifiers

PMID37961628
PMCPMC10634987
OpenAlexW4316190287

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.