Evidence map›Paper›PMID 37961520›Full record

ArticleResearch square2023

Whole genome analysis of rare deleterious variants adds further evidence to BRSK2 and other risk genes in Autism Spectrum Disorder.

Elena Bacchelli, Marta Viggiano, Fabiola Ceroni, Paola Visconti, Annio Posar, Maria Scaduto, Laura Sandoni, Irene Baravelli, Cinzia Cameli, Magali Rochat and 7 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Elena BacchelliUniversity of Bologna.ORCID 0000-0001-8800-9568
Marta ViggianoUniversity of Bologna.
Fabiola CeroniUniversity of Bologna.
Paola ViscontiIRCCS Istituto delle Scienze Neurologiche di Bologna.
Annio PosarIRCCS Istituto delle Scienze Neurologiche di Bologna.
Maria ScadutoIRCCS Istituto delle Scienze Neurologiche di Bologna.
Laura SandoniUniversity of Bologna.
Irene BaravelliUniversity of Bologna.
Cinzia CameliUniversity of Bologna.
Magali RochatIRCCS Istituto delle Scienze Neurologiche di Bologna.
Alessandra MarescaIRCCS Istituto delle Scienze Neurologiche di Bologna.
Alessandro VaisfeldUniversity of Bologna.
Davide GentiliniUniversity of Pavia.
Luciano CalzariIstituto Auxologico Italiano IRCCS.
Valerio CarelliIRCCS Istituto delle Scienze Neurologiche di Bologna.
Michael ZodyNew York Genome Center (NYGC).
Elena MaestriniUniversity of Bologna.
University of Bologna · ITIstituto delle Scienze Neurologiche di Bologna · ITIRCCS Istituto Auxologico Italiano · ITNew York Genome Center · USUniversity of Pavia · IT

Funding

New York Center for Collaborative Research In Common Disease Genomics: Genome Aggregation and Joint Variant Calling for CCDG Freeze2UM1HG008901 · NHGRI · NEW YORK GENOME CENTER · PI MANIATIS, THOMAS P, WIGLER, MICHAEL H · 2016 to 2020
$56.6M
NHGRI Genome Sequencing Program Coordinating CenterU24HG008956 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI BUYSKE, STEVEN G, MATISE, TARA C. · 2016 to 2020
$4.9M
NHGRI NIH HHS U24 HG008956NHGRI NIH HHS UM1 HG008901
6 · The paper itself

Abstract

Autism spectrum disorder (ASD) is a complex neurodevelopmental condition with a strong genetic component in which rare variants contribute significantly to risk. We have performed whole genome and/or exome sequencing (WGS and WES) and SNP-array analysis to identify both rare sequence and copy number variants (SNVs and CNVs) in 435 individuals from 116 ASD families. We identified 37 rare potentially damaging de novo SNVs (pdSNVs) in cases (n = 144). Interestingly, two of them (one stop-gain and one missense variant) occurred in the same gene, BRSK2. Moreover, the identification of 9 severe de novo pdSNVs in genes not previously implicated in ASD (

Identifiers

PMID37961520
PMCPMC10635364
OpenAlexW4387999469

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.