Evidence map›Paper›PMID 37961468›Full record

ArticlebioRxiv : the preprint server for biology2023

Learning gene networks under SNP perturbation using SNP and allele-specific expression data.

Jun Ho Yoon, Seyoung Kim

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jun Ho YoonComputational Biology Department, Carnegie Mellon University, Pittsburgh, PA 15213, United States of America.
Seyoung KimComputational Biology Department, Carnegie Mellon University, Pittsburgh, PA 15213, United States of America.
Carnegie Mellon University · US

Funding

Statistical Approach to Uncovering Gene Networks Perturbed by Cis-acting and Trans-acting eQTLswith Active LearningR21HG010948 · NHGRI · CARNEGIE-MELLON UNIVERSITY · PI KIM, SEYOUNG · 2020 to 2020
$377k
NHGRI NIH HHS R21 HG010948
6 · The paper itself

Abstract

Allele-specific expression quantification from RNA-seq reads provides opportunities to study the control of gene regulatory networks by

Identifiers

PMID37961468
PMCPMC10634764
OpenAlexW4387905647

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.