Evidence map›Paper›PMID 37961377›Full record

ArticleResearch square2023

Clinical Text Summarization: Adapting Large Language Models Can Outperform Human Experts.

Dave Van Veen, Cara Van Uden, Louis Blankemeier, Jean-Benoit Delbrouck, Asad Aali, Christian Bluethgen, Anuj Pareek, Malgorzata Polacin, Eduardo Pontes Reis, Anna Seehofnerová and 9 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 89 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 3 countries.

Dave Van VeenDepartment of Electrical Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0003-4574-0283
Cara Van UdenStanford Center for Artificial Intelligence in Medicine and Imaging, Palo Alto, CA, USA.
Louis BlankemeierDepartment of Electrical Engineering, Stanford University, Stanford, CA, USA.
Jean-Benoit DelbrouckStanford Center for Artificial Intelligence in Medicine and Imaging, Palo Alto, CA, USA.
Asad AaliDepartment of Electrical and Computer Engineering, The University of Texas at Austin, Austin, TX, USA.
Christian BluethgenDepartment of Medicine, Stanford, CA, USA.ORCID 0000-0001-7321-5676
Anuj PareekStanford Center for Artificial Intelligence in Medicine and Imaging, Palo Alto, CA, USA.ORCID https://orcid.org/0000-0002-1526-3685
Malgorzata PolacinDepartment of Medicine, Stanford, CA, USA.
Eduardo Pontes ReisStanford Center for Artificial Intelligence in Medicine and Imaging, Palo Alto, CA, USA.
Anna SeehofnerováDepartment of Medicine, Stanford, CA, USA.
Nidhi RohatgiDepartment of Medicine, Stanford, CA, USA.ORCID 0000-0003-4574-0283
Poonam HosamaniDepartment of Medicine, Stanford, CA, USA.
William CollinsDepartment of Medicine, Stanford, CA, USA.ORCID 0000-0003-0974-2599
Neera AhujaDepartment of Medicine, Stanford, CA, USA.
Curtis P LanglotzStanford Center for Artificial Intelligence in Medicine and Imaging, Palo Alto, CA, USA.ORCID 0000-0002-8972-8051
Jason HomDepartment of Medicine, Stanford, CA, USA.
Sergios GatidisStanford Center for Artificial Intelligence in Medicine and Imaging, Palo Alto, CA, USA.
John PaulyDepartment of Electrical Engineering, Stanford University, Stanford, CA, USA.
Akshay S ChaudhariStanford Center for Artificial Intelligence in Medicine and Imaging, Palo Alto, CA, USA.ORCID 0000-0002-3667-6796
Association for the Advancement of Artificial Intelligence · USStanford Medicine · USUniversity Hospital of Zurich · CHStanford University · USThe University of Texas at Austin · US

Funding

Rapid MRI for Evaluation of OsteoarthritisR01EB002524 · NIBIB · STANFORD UNIVERSITY · PI Akshay Chaudhari, Garry E Gold · 2003 to 2026
$10.1M
TR&D Project 3: OpenSim for PredictionP41EB027060 · NIBIB · STANFORD UNIVERSITY · PI Joy P Ku · 2020 to 2026
$9.7M
RADX TECH - CERES NANOSCIENCE INC NANOTRAP PARTICLE MANUFACTURING75N92020C00021 · NHLBI · CERES NANOSCIENCES, LLLP · PI DUNLAP, ROSS · 2021 to 2021
$4.0M
Rapid Low-Cost Quantitative 3D MRI and Gait Assessment of the KneeR01AR077604 · NIAMS · STANFORD UNIVERSITY · PI HARGREAVES, BRIAN ANDREW · 2020 to 2024
$3.2M
Radiomics approach to engineering an artificial intelligence based echocardiography platform to predict cardiovascular surgery and heart failure outcomes.R01HL157235 · NHLBI · STANFORD UNIVERSITY · PI William Hiesinger · 2022 to 2026
$3.1M
Imaging of Joint Response to Physiological Stress with Age, Sex and in OsteoarthritisR01AR079431 · NIAMS · STANFORD UNIVERSITY · PI Feliks Kogan · 2022 to 2026
$2.9M
Opportunistic Atherosclerotic Cardiovascular Disease Risk Estimation at Abdominal CTs with Robust and Unbiased Deep LearningR01HL167974 · NHLBI · STANFORD UNIVERSITY · PI Imon Banerjee, Akshay Chaudhari · 2023 to 2026
$2.4M
Population-level Pulmonary Embolism Outcome Prediction with Imaging and Clinical Data: A Multi-Center StudyR01HL155410 · NHLBI · STANFORD UNIVERSITY · PI LANGLOTZ, CURTIS P, SHAH, NIGAM H · 2021 to 2024
$2.1M
Adaptation and pilot implementation of a validated, electronic real time clinical decision support tool for care of Pneumonia patients in 12 Utah Urgent Care CentersR18HS026886 · AHRQ · IHC HEALTH SERVICES, INC. · PI DEAN, NATHAN C · 2020 to 2022
$1.3M
AHRQ HHS R18 HS026886NHLBI NIH HHS 75N92020C00008NHLBI NIH HHS 75N92020C00021NHLBI NIH HHS R01 HL155410NHLBI NIH HHS R01 HL157235NHLBI NIH HHS R01 HL167974NIAMS NIH HHS R01 AR077604NIAMS NIH HHS R01 AR079431NIBIB NIH HHS P41 EB027060NIBIB NIH HHS R01 EB002524
6 · The paper itself

Abstract

Sifting through vast textual data and summarizing key information from electronic health records (EHR) imposes a substantial burden on how clinicians allocate their time. Although large language models (LLMs) have shown immense promise in natural language processing (NLP) tasks, their efficacy on a diverse range of clinical summarization tasks has not yet been rigorously demonstrated. In this work, we apply domain adaptation methods to eight LLMs, spanning six datasets and four distinct clinical summarization tasks: radiology reports, patient questions, progress notes, and doctor-patient dialogue. Our thorough quantitative assessment reveals trade-offs between models and adaptation methods in addition to instances where recent advances in LLMs may not improve results. Further, in a clinical reader study with ten physicians, we show that summaries from our best-adapted LLMs are preferable to human summaries in terms of completeness and correctness. Our ensuing qualitative analysis highlights challenges faced by both LLMs and human experts. Lastly, we correlate traditional quantitative NLP metrics with reader study scores to enhance our understanding of how these metrics align with physician preferences. Our research marks the first evidence of LLMs outperforming human experts in clinical text summarization across multiple tasks. This implies that integrating LLMs into clinical workflows could alleviate documentation burden, empowering clinicians to focus more on personalized patient care and the inherently human aspects of medicine.

Identifiers

PMID37961377
PMCPMC10635391
OpenAlexW4388022708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.