Evidence map›Paper›PMID 37961316›Full record

ArticlebioRxiv : the preprint server for biology2024

Identification and characterization of intermediate states in mammalian neural crest cell epithelial to mesenchymal transition and delamination.

Ruonan Zhao, Emma L Moore, Madelaine M Gogol, Jay R Unruh, Zulin Yu, Allison Scott, Yan Wang, Naresh Kumar Rajendran, Paul A Trainor

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ruonan ZhaoStowers Institute for Medical Research, Kansas City, MO, USA.
Emma L MooreStowers Institute for Medical Research, Kansas City, MO, USA.
Madelaine M GogolStowers Institute for Medical Research, Kansas City, MO, USA.ORCID 0000-0002-8738-0995
Jay R UnruhStowers Institute for Medical Research, Kansas City, MO, USA.ORCID 0000-0003-3077-4990
Zulin YuStowers Institute for Medical Research, Kansas City, MO, USA.
Allison ScottStowers Institute for Medical Research, Kansas City, MO, USA.
Yan WangStowers Institute for Medical Research, Kansas City, MO, USA.
Naresh Kumar RajendranStowers Institute for Medical Research, Kansas City, MO, USA.
Paul A TrainorStowers Institute for Medical Research, Kansas City, MO, USA.ORCID 0000-0003-2774-3624
Stowers Institute for Medical Research · US

Funding

Using PCORnet to Expand the DS-CONNECT Cohort Through Healthcare System Recruitment, Incorporating Electronic Health Records, and Assessing Self-DeterminationU54HD090216 · NICHD · UNIVERSITY OF KANSAS LAWRENCE · PI COLOMBO, JOHN A. · 2016 to 2020
$6.2M
Molecular Regulation of Cell Development and Differentiation Phase III COBREP30GM122731 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI LITTLE, CHARLES D. · 2017 to 2021
$5.6M
High Throughput Sequencing System for KUMC Genomics CoreS10OD021743 · OD · UNIVERSITY OF KANSAS MEDICAL CENTER · PI SMITH, PETER G · 2017 to 2017
$493k
The regulation and cellular dynamics of neural crest cell delamination in mammalian craniofacial developmentF31DE032256 · NIDCR · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI ZAJIC, EMMA · 2022 to 2024
$79k
NICHD NIH HHS U54 HD090216NIDCR NIH HHS F31 DE032256NIGMS NIH HHS P30 GM122731NIH HHS S10 OD021743
6 · The paper itself

Abstract

Epithelial to mesenchymal transition (EMT) is a cellular process that converts epithelial cells to mesenchymal cells with migratory potential in both developmental and pathological processes. Although originally considered a binary event, EMT in cancer progression involves intermediate states between a fully epithelial and a fully mesenchymal phenotype, which are characterized by distinct combinations of epithelial and mesenchymal markers. This phenomenon has been termed epithelial to mesenchymal plasticity (EMP), however, the intermediate states remain poorly described and it's unclear whether they exist during developmental EMT. Neural crest cells (NCC) are an embryonic progenitor cell population that gives rise to numerous cell types and tissues in vertebrates, and their formation is a classic example of developmental EMT. An important feature of NCC development is their delamination from the neuroepithelium via EMT, following which NCC migrate throughout the embryo and undergo differentiation. NCC delamination shares similar changes in cellular state and structure with cancer cell invasion. However, whether intermediate states also exist during NCC EMT and delamination remains unknown. Through single cell RNA sequencing, we identified intermediate NCC states based on their transcriptional signature and then spatially defined their locations in situ in the dorsolateral neuroepithelium. Our results illustrate the progressive transcriptional and spatial transitions from premigratory to migratory cranial NCC during EMT and delamination. Of note gene expression and trajectory analysis indicate that distinct intermediate populations of NCC delaminate in either S phase or G2/M phase of the cell cycle, and the importance of cell cycle regulation in facilitating mammalian cranial NCC delamination was confirmed through cell cycle inhibition studies. Additionally, transcriptional knockdown revealed a functional role for the intermediate stage marker

Indexed as

cell cycleDlc1EMPEMTepithelial to mesenchymal plasticityepithelial to mesenchymal transitionmouseneural crest cells

Identifiers

PMID37961316
PMCPMC10634855
OpenAlexW4388195430

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.