Evidence map›Paper›PMID 37961129›Full record

ArticlebioRxiv : the preprint server for biology2023

Comprehensive single cell aging atlas of mammary tissues reveals shared epigenomic and transcriptomic signatures of aging and cancer.

Brittany L Angarola, Siddhartha Sharma, Neerja Katiyar, Hyeon Gu Kang, Djamel Nehar-Belaid, SungHee Park, Rachel Gott, Giray N Eryilmaz, Mark A LaBarge, Karolina Palucka and 4 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Brittany L AngarolaThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0001-8320-6781
Siddhartha SharmaThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0002-8799-388X
Neerja KatiyarThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Hyeon Gu KangThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Djamel Nehar-BelaidThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0001-6002-5021
SungHee ParkThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Rachel GottThe Jackson Laboratory, Bar Harbor, ME, USA.
Giray N EryilmazThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Mark A LaBargeBeckman Research Institute at City of Hope, Duarte, CA, USA.ORCID 0000-0003-2405-4719
Karolina PaluckaThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0002-1600-6066
Jeffrey H ChuangThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0002-3298-2358
Ron KorstanjeThe Jackson Laboratory, Bar Harbor, ME, USA.ORCID 0000-0002-2808-1610
Duygu UcarThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0002-9772-3066
Olga AnczukowThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0003-0516-2677
Jackson Laboratory · USCity of Hope · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Paul Robson · 1985 to 2026
$61.9M
Translational CoreP30AG038070 · NIA · JACKSON LABORATORY · PI John Matthew Mahoney · 2010 to 2026
$19.3M
Training Program in Precision Genetics of Aging, Alzheimer's Disease and Related DementiasT32AG062409 · NIA · JACKSON LABORATORY · PI Gareth R Howell, KRISTEN M O'CONNELL · 2020 to 2026
$1.5M
NCI NIH HHS P30 CA034196NIA NIH HHS P30 AG038070NIA NIH HHS T32 AG062409
6 · The paper itself

Abstract

Aging is the greatest risk factor for breast cancer; however, how age-related cellular and molecular events impact cancer initiation is unknown. We investigate how aging rewires transcriptomic and epigenomic programs of mouse mammary glands at single cell resolution, yielding a comprehensive resource for aging and cancer biology. Aged epithelial cells exhibit epigenetic and transcriptional changes in metabolic, pro-inflammatory, or cancer-associated genes. Aged stromal cells downregulate fibroblast marker genes and upregulate markers of senescence and cancer-associated fibroblasts. Among immune cells, distinct T cell subsets (

Identifiers

PMID37961129
PMCPMC10634680
OpenAlexW4387895254

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.