Evidence map›Paper›PMID 37960075›Full record

ArticlePlants (Basel, Switzerland)2023

Genome-Wide Association Studies of Biluochun Tea Plant Populations in Dongting Mountain and Comprehensive Identification of Candidate Genes Associated with Core Agronomic Traits by Four Analysis Models.

Xiaogang Lei, Haoyu Li, Pingping Li, Huan Zhang, Zhaolan Han, Bin Yang, Yu Duan, Ndombi Salome Njeri, Daqiang Yang, Junhua Zheng and 3 more

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Xiaogang LeiCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Haoyu LiDongshan Agriculture and Forestry Service Station, Suzhou 215100, China.
Pingping LiCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Huan ZhangCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Zhaolan HanCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Bin YangCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Yu DuanCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Ndombi Salome NjeriCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Daqiang YangDongshan Agriculture and Forestry Service Station, Suzhou 215100, China.
Junhua ZhengDongshan Agriculture and Forestry Service Station, Suzhou 215100, China.
Yuanchun MaCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Xujun ZhuCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0001-8932-4324
Wanping FangCollege of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.

Funding

National Natural Science Foundation of China 31972460Science and Technology Support Project of Guizhou Province ZK[2021]154Science and technology support project of Suzhou SNG2023001the China Agriculture Research System of MOF and MARA CARS-19the Priority Academic Program Development of Jiangsu Higher Education Institutions no
6 · The paper itself

Abstract

The elite germplasm resources are key to the beautiful appearance and pleasant flavor of Biluochun tea. We collected and measured the agronomic traits of 95 tea plants to reveal the trait diversity and breeding value of Biluochun tea plant populations. The results revealed that the agronomic traits of Biluochun tea plant populations were diverse and had high breeding value. Additionally, we resequenced these tea plant populations to reveal genetic diversity, population structure, and selection pressure. The Biluochun tea plant populations contained two groups and were least affected by natural selection based on the results of population structure and selection pressure. More importantly, four non-synonymous single nucleotide polymorphisms (nsSNPs) and candidate genes associated with (-)-gallocatechin gallate (GCG), (-)-gallocatechin (GC), and caffeine (CAF) were detected using at least two GWAS models. The results will promote the development and application of molecular markers and the utilization of elite germplasm from Biluochun populations.

Indexed as

agronomic traitsBiluochun tea plantgenome-wide association studymarker-assisted breedingsingle nucleotide polymorphisms

Identifiers

PMID37960075
PMCPMC10650078

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.