Evidence map›Paper›PMID 37958892›Full record

ArticleInternational journal of molecular sciences2023

Interaction of Methylene Blue with Severe Acute Respiratory Syndrome Coronavirus 2 Envelope Revealed by Molecular Modeling.

Ilya Kovalenko, Ekaterina Kholina, Vladimir Fedorov, Sergei Khruschev, Ekaterina Vasyuchenko, Gennady Meerovich, Marina Strakhovskaya

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Promising Prodiginins Biological Activities.Chemistry & biodiversity · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ilya KovalenkoFaculty of Biology, Lomonosov Moscow State University, Moscow 119234, Russia.ORCID 0000-0002-4949-6591
Ekaterina KholinaFaculty of Biology, Lomonosov Moscow State University, Moscow 119234, Russia.ORCID 0000-0002-5918-5084
Vladimir FedorovFaculty of Biology, Lomonosov Moscow State University, Moscow 119234, Russia.ORCID 0000-0002-9397-1548
Sergei KhruschevFaculty of Biology, Lomonosov Moscow State University, Moscow 119234, Russia.ORCID 0000-0002-4714-6221
Ekaterina VasyuchenkoFaculty of Biology, Lomonosov Moscow State University, Moscow 119234, Russia.
Gennady MeerovichProkhorov General Physics Institute of the Russian Academy of Sciences, Moscow 119991, Russia.
Marina StrakhovskayaFaculty of Biology, Lomonosov Moscow State University, Moscow 119234, Russia.ORCID 0000-0002-4571-0431
Lomonosov Moscow State University · RUProkhorov General Physics Institute · RU

Funding

Scientific and Educational Mathematical Center «Sofia Kovalevskaya Northwestern Center for Mathematical Research» 075-02-2023-937
6 · The paper itself

Abstract

Methylene blue has multiple antiviral properties against Severe Acute Respiratory Syndrome-related Coronavirus 2 (SARS-CoV-2). The ability of methylene blue to inhibit different stages of the virus life cycle, both in light-independent and photodynamic processes, is used in clinical practice. At the same time, the molecular aspects of the interactions of methylene blue with molecular components of coronaviruses are not fully understood. Here, we use Brownian dynamics to identify methylene blue binding sites on the SARS-CoV-2 envelope. The local lipid and protein composition of the coronavirus envelope plays a crucial role in the binding of this cationic dye. Viral structures targeted by methylene blue include the S and E proteins and negatively charged lipids. We compare the obtained results with known experimental data on the antiviral effects of methylene blue to elucidate the molecular basis of its activity against coronaviruses.

Indexed as

COVID-19SARS-CoV-2Antiviral AgentsBinding SitesHumansMethylene BlueAntiviral AgentsMethylene BlueBrownian dynamicscoarse grain modelingelectrostatic interactionsmethylene blueSARS-CoV-2 envelopestructural proteinsviral membrane

Identifiers

PMID37958892
PMCPMC10650479
OpenAlexW4388221712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.