Evidence map›Paper›PMID 37958414›Full record

ArticleCancers2023

Clinical-Genomic Risk Group Classification of Suspicious Lesions on Prostate Multiparametric-MRI.

Radka Stoyanova, Olmo Zavala-Romero, Deukwoo Kwon, Adrian L Breto, Isaac R Xu, Ahmad Algohary, Mohammad Alhusseini, Sandra M Gaston, Patricia Castillo, Oleksandr N Kryvenko and 8 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 1 country.

Radka StoyanovaDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Olmo Zavala-RomeroDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.ORCID 0000-0001-7088-3820
Deukwoo KwonSylvester Comprehensive Cancer Center, University of Miami, Miami, FL 33136, USA.
Adrian L BretoDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Isaac R XuDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Ahmad AlgoharyDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Mohammad AlhusseiniDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Sandra M GastonDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.ORCID 0000-0002-0564-0459
Patricia CastilloDepartment of Radiology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Oleksandr N KryvenkoDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Elai DavicioniResearch and Development, Veracyte Inc., San Francisco, CA 94080, USA.ORCID 0000-0001-9136-099X
Bruno NaharSylvester Comprehensive Cancer Center, University of Miami, Miami, FL 33136, USA.
Benjamin SpielerDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Matthew C AbramowitzDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Alan Dal PraDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Dipen J ParekhSylvester Comprehensive Cancer Center, University of Miami, Miami, FL 33136, USA.
Sanoj PunnenSylvester Comprehensive Cancer Center, University of Miami, Miami, FL 33136, USA.
Alan PollackDepartment of Radiation Oncology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
University of Miami · USVeracyte (United States) · US

Funding

Tumor Biology Research ProgramP30CA240139 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI George S. Grills · 2019 to 2026
$24.1M
UM Calabresi Clinical Oncology Research Career Development AwardK12CA226330 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Alan Pollack · 2018 to 2026
$5.1M
MRI Imaging and Genetic Signatures to Manage Prostate Cancer OverdiagnosisR01CA189295 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI POLLACK, ALAN · 2014 to 2018
$3.2M
MRI Imaging and Biomarkers for Early Detection of Aggressive Prostate CancerU01CA239141 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI POLLACK, ALAN, PUNNEN, SANOJ · 2019 to 2023
$3.0M
(PQC4) Habitats in Prostate CancerR01CA190105 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI BALAGURUNATHAN, YOGANAND, GILLIES, ROBERT J. · 2014 to 2017
$2.8M
Prostate Needle Biopsies: Impact of Preanalytical Procurement and Processing Variables on the Detection of Gene Expression Signatures of Prostate Cancer AggressivenessU01CA271400 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI SANDRA M GASTON, Alan Pollack · 2022 to 2026
$1.7M
NCI NIH HHS K12 CA226330NCI NIH HHS P30 CA240139NCI NIH HHS R01 CA189295NCI NIH HHS R01 CA190105NCI NIH HHS U01 CA239141NCI NIH HHS U01 CA271400
6 · The paper itself

Abstract

The utilization of multi-parametric MRI (mpMRI) in clinical decisions regarding prostate cancer patients' management has recently increased. After biopsy, clinicians can assess risk using National Comprehensive Cancer Network (NCCN) risk stratification schema and commercially available genomic classifiers, such as Decipher. We built radiomics-based models to predict lesions/patients at low risk prior to biopsy based on an established three-tier clinical-genomic classification system. Radiomic features were extracted from regions of positive biopsies and Normally Appearing Tissues (NAT) on T2-weighted and Diffusion-weighted Imaging. Using only clinical information available prior to biopsy, five models for predicting low-risk lesions/patients were evaluated, based on: 1: Clinical variables; 2: Lesion-based radiomic features; 3: Lesion and NAT radiomics; 4: Clinical and lesion-based radiomics; and 5: Clinical, lesion and NAT radiomic features. Eighty-three mpMRI exams from 78 men were analyzed. Models 1 and 2 performed similarly (Area under the receiver operating characteristic curve were 0.835 and 0.838, respectively), but radiomics significantly improved the lesion-based performance of the model in a subset analysis of patients with a negative Digital Rectal Exam (DRE). Adding normal tissue radiomics significantly improved the performance in all cases. Similar patterns were observed on patient-level models. To the best of our knowledge, this is the first study to demonstrate that machine learning radiomics-based models can predict patients' risk using combined clinical-genomic classification.

Indexed as

clinical-genomic risk classificationDeciphermultiparametric MRIprostate cancerradiomics

Identifiers

PMID37958414
PMCPMC10647832
OpenAlexW4388078817

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.