Evidence map›Paper›PMID 37956323›Full record

ArticleClinical chemistry2023

Sensitive Blood-Based Detection of HIV-1 and Mycobacterium tuberculosis Peptides for Disease Diagnosis by Immuno-Affinity Liquid Chromatography-Tandem Mass Spectrometry: A Method Development and Proof-of-Concept Study.

Lin Li, Christopher J Lyon, Sylvia M LaCourse, Wenshu Zheng, Joshua Stern, Jaclyn N Escudero, Wilfred Bundi Murithi, Lilian Njagi, Grace John-Stewart, Thomas R Hawn and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 3 countries.

Lin LiDepartment of Laboratory Medicine and Sichuan Provincial Key Laboratory for Human Disease Gene Study, Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital, Chengdu, China.ORCID 0000-0003-1839-8048
Christopher J LyonCenter for Cellular and Molecular Diagnostics, Department of Biochemistry and Molecular Biology, School of Medicine, Tulane University, New Orleans, LA, United States.
Sylvia M LaCourseDepartment of Medicine, University of Washington, Seattle, WA, United States.
Wenshu ZhengCenter for Cellular and Molecular Diagnostics, Department of Biochemistry and Molecular Biology, School of Medicine, Tulane University, New Orleans, LA, United States.
Joshua SternDepartment of Global Health, University of Washington, Seattle, WA, United States.
Jaclyn N EscuderoDepartment of Global Health, University of Washington, Seattle, WA, United States.
Wilfred Bundi MurithiCentre for Respiratory Diseases Research, Kenya Medical Research Institute, Nairobi, Kenya.
Lilian NjagiCentre for Respiratory Diseases Research, Kenya Medical Research Institute, Nairobi, Kenya.
Grace John-StewartDepartment of Medicine, University of Washington, Seattle, WA, United States.ORCID 0000-0002-4301-1573
Thomas R HawnDepartment of Medicine, University of Washington, Seattle, WA, United States.
Videlis NdubaCentre for Respiratory Diseases Research, Kenya Medical Research Institute, Nairobi, Kenya.
Wael AbdelgalielNanoPin Technologies, New Orleans, LA, United States.
Thomas TomblerNanoPin Technologies, New Orleans, LA, United States.
David HorneDepartment of Medicine, University of Washington, Seattle, WA, United States.
Li JiangDepartment of Laboratory Medicine and Sichuan Provincial Key Laboratory for Human Disease Gene Study, Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital, Chengdu, China.ORCID 0000-0001-7062-0027
Tony Y HuCenter for Cellular and Molecular Diagnostics, Department of Biochemistry and Molecular Biology, School of Medicine, Tulane University, New Orleans, LA, United States.ORCID 0000-0002-5166-4937
University of Washington · USTulane University · USKenya Medical Research Institute · KESichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital · CN

Funding

University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI EDWIN ROBERTO ORELLANA · 1988 to 2026
$104.9M
Direct quantitation of the circulating Mtb-peptidome for pediatric TB managementR01HD090927 · NICHD · TULANE UNIVERSITY OF LOUISIANA · PI Christopher J Lyon, Charles DeBeaux Mitchell · 2017 to 2026
$4.5M
Mtb and HIV/SIV antigen peptide signatures as blood biomarkers to detect early infection to active disease in young children and NHPR01HD103511 · NICHD · TULANE UNIVERSITY OF LOUISIANA · PI LYON, CHRISTOPHER J · 2021 to 2025
$3.7M
Aerobiology, immunology, and Mycobacterium tuberculosis transmissionR01AI150815 · NIAID · UNIVERSITY OF WASHINGTON · PI HAWN, THOMAS R, HORNE, DAVID J. · 2020 to 2024
$3.5M
M. tuberculosis exosome detection for pediatric TB diagnosisR01AI162152 · NIAID · UNIVERSITY OF WASHINGTON · PI LACOURSE, SYLVIA · 2021 to 2025
$3.3M
Digital Nanoplasmonic Quantification of Tumor-derived Extracellular Vesicles in Plasma MicrosamplesU01CA252965 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI HU, TONY Y., LU, HUA · 2020 to 2024
$3.0M
A nanopore biosensor for leveling Mtb antigens in bloodR01AI144168 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI Christopher J Lyon · 2022 to 2026
$3.0M
Multiplexed detection of cell-free M. Tuberculosis DNA and its drug-resistant variants in bloodR01AI175618 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI Zhen Huang, Jeffrey Tornheim · 2023 to 2026
$2.9M
Tuberculosis & HIV Co-Infection Training Program in KenyaD43TW011817 · FIC · UNIVERSITY OF WASHINGTON · PI Thomas R Hawn, VIDELIS NDUBA · 2021 to 2026
$1.6M
NanoDisk-MS measured Mtb antigen peptides for TB diagnosis and treatment monitoring in HIV-infected childrenR21AI143341 · NIAID · UNIVERSITY OF WASHINGTON · PI LACOURSE, SYLVIA · 2019 to 2020
$443k
Quantification of brain-derived extracellular vesicle microRNAs in blood by a liposome-mediated CRISPR assay for traumatic brain injury detectionR21NS130542 · NINDS · TULANE UNIVERSITY OF LOUISIANA · PI HU, TONY Y. · 2022 to 2022
$437k
Mycobacterium tuberculosis aerobiology and novel tools to assess infectiousnessUH2AI152621 · NIAID · UNIVERSITY OF WASHINGTON · PI HORNE, DAVID J. · 2021 to 2022
$365k
FIC NIH HHS D43 TW011817NCI NIH HHS U01 CA252965NIAID NIH HHS P30 AI027757NIAID NIH HHS R01 AI144168NIAID NIH HHS R01 AI150815NIAID NIH HHS R01 AI162152NIAID NIH HHS R01 AI175618NIAID NIH HHS R21 AI143341NIAID NIH HHS UH2 AI152621NICHD NIH HHS R01 HD090927NICHD NIH HHS R01 HD103511NINDS NIH HHS R21 NS130542
6 · The paper itself

Abstract

backgroundNovel approaches that allow early diagnosis and treatment monitoring of both human immunodeficiency virus-1 (HIV-1) and tuberculosis disease (TB) are essential to improve patient outcomes.

methodsWe developed and validated an immuno-affinity liquid chromatography-tandem mass spectrometry (ILM) assay that simultaneously quantifies single peptides derived from HIV-1 p24 and Mycobacterium tuberculosis (Mtb) 10-kDa culture filtrate protein (CFP10) in trypsin-digested serum derived from cryopreserved serum archives of cohorts of adults and children with/without HIV and TB.

resultsILM p24 and CFP10 results demonstrated good intra-laboratory precision and accuracy, with recovery values of 96.7% to 104.6% and 88.2% to 111.0%, total within-laboratory precision (CV) values of 5.68% to 13.25% and 10.36% to 14.92%, and good linearity (r2 > 0.99) from 1.0 to 256.0 pmol/L and 0.016 to 16.000 pmol/L, respectively. In cohorts of adults (n = 34) and children (n = 17) with HIV and/or TB, ILM detected p24 and CFP10 demonstrated 85.7% to 88.9% and 88.9% to 100.0% diagnostic sensitivity for HIV-1 and TB, with 100% specificity for both, and detected HIV-1 infection earlier than 3 commercial p24 antigen/antibody immunoassays. Finally, p24 and CFP10 values measured in longitudinal serum samples from children with HIV-1 and TB distinguished individuals who responded to TB treatment from those who failed to respond or were untreated, and who developed TB immune reconstitution inflammatory syndrome.

conclusionsSimultaneous ILM evaluation of p24 and CFP10 results may allow for early TB and HIV detection and provide valuable information on treatment response to facilitate integration of TB and HIV diagnosis and management.

Indexed as

HIV-1HIV InfectionsMycobacterium tuberculosisAdultChildChromatography, LiquidHumansPeptidesSensitivity and SpecificityTandem Mass SpectrometryPeptides

Identifiers

PMID37956323
PMCPMC10965313
OpenAlexW4388622013

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.