Evidence map›Paper›PMID 37955695›Full record

ArticleArchives of virology2023

miRNA profiling of primary lamb testicle cells infected with lumpy skin disease virus.

Sakshi Pandita, Assim Verma, Himanshu Kamboj, Ram Kumar, Yogesh Chander, Sanjay Barua, Bhupendra Nath Tripathi, Naveen Kumar

Abstract read
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In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sakshi Pandita *National Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India.
Assim Verma *National Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India.
Himanshu KambojNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India.
Ram KumarNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India.
Yogesh ChanderNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India.
Sanjay BaruaNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India.
Bhupendra Nath TripathiNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India.
Naveen KumarNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, Haryana, 125001, India. Naveen.Kumar1@icar.gov.in.ORCID http://orcid.org/0000-0003-3974-9409

Funding

Indian Council of Agricultural Research IXX16675
6 · The paper itself

Abstract

In this study, miRNA profiling of cells infected with lumpy skin disease virus (LSDV) was conducted for the first time. When compared to mock-infected cells, LSDV-infected primary lamb testicle (LT) cells showed dysregulation of 64, 85, and 85 miRNAs at 12 hours postinfection (hpi), 48 hpi, and 72 hpi, respectively. While some of these miRNAs were found to be dysregulated at a particular time point following LSDV infection, others were dysregulated at all three time points. Analysis of the differentially expressed miRNA-mRNA interaction networks, Gene Ontology analysis of the predicted targets, and KEGG analysis of highly enriched pathways revealed several cellular factors/pathways involved in protein/ion/enzyme binding, cell differentiation, movement of subcellular components, calcium reabsorption, aldosterone synthesis and secretion, and melanogenesis. Some selected upregulated (oar-mir-379-5p, oar-let-7d, Chr10-18769, Chr2_5162 and oar-miR-493-5p) and downregulated (ChrX-33741, Chr3_8257 and Chr26_32680) miRNAs were further confirmed by quantitative real-time PCR. These findings contribute to our understanding of virus replication, virus-host interactions, and disease pathogenesis, and the differentially expressed miRNAs and their cellular targets may serve as biomarkers as well as novel targets for therapeutic intervention against LSDV.

Indexed as

Lumpy skin disease virusMicroRNAsAnimalsCalciumCattleCell DifferentiationMaleSheepTestisCalciumMicroRNAs

Identifiers

PMID37955695

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