Evidence map›Paper›PMID 37953794›Full record

ArticlePeerJ2023

circMSH3 is a potential biomarker for the diagnosis of colorectal cancer and affects the distant metastasis of colorectal cancer.

Jian Shen, Yu Min, Jingen Luo, Xingkui Tang, Zeping Han, Wenfeng Luo, Fangmei Xie, Mingrong Cao, Taicheng Zhou, Jinhua He

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 69% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jian Shen *Department of Central Laboratory, Guangzhou Panyu Central Hospital, Guangzhou, Guangdong, China.
Yu Min *Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China.
Jingen LuoDepartment of General Surgery, Guangzhou Panyu Central Hospital, Guangzhou, Guangdong, China.
Xingkui TangDepartment of General Surgery, Guangzhou Panyu Central Hospital, Guangzhou, Guangdong, China.
Zeping HanDepartment of Central Laboratory, Guangzhou Panyu Central Hospital, Guangzhou, Guangdong, China.
Wenfeng LuoDepartment of Central Laboratory, Guangzhou Panyu Central Hospital, Guangzhou, Guangdong, China.
Fangmei XieDepartment of Central Laboratory, Guangzhou Panyu Central Hospital, Guangzhou, Guangdong, China.
Mingrong CaoDepartment of Hepatobiliary Surgery, The First Affiliated Hospital of Jinan University, Guangzhou, Guangdong, China.
Taicheng ZhouDepartment of Gastroenterological Surgery and Hernia Center & Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Jinhua HeDepartment of Central Laboratory, Guangzhou Panyu Central Hospital, Guangzhou, Guangdong, China.
Panyu District Central Hospital · CNFirst Affiliated Hospital of Jinan University · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: To identify the most significantly differentially expressed circular RNAs (circRNAs) in colorectal cancer (CRC) tissues in terms of their expression levels and circularity, and to analyze the relationship between their expression levels and the clinical characteristics of patients. Methods: circRNA RNA-seq technology was used to screen differentially expressed circRNAs in CRC. Sanger sequencing was used to identify circRNA back-splice junction sites. The relative expression levels of hsa_circ_0003761 (circMSH3) in CRC tissues and cell lines were detected by quantitative real-time fluorescence PCR technology. An RNA-protein pull-down assay was used to detect protein binding to circRNAs. Dual-luciferase reporter gene vectors were constructed to verify that circRNAs bind to microRNAs. Results: Four hundred twenty circRNAs were found to be upregulated, and 616 circRNAs were downregulated. circMSH3 was derived from the MutS homolog 3 (MSH3) gene and was formed by a loop of exons 9, 10, 11, and 12. In 110 pairs of CRC and adjacent tissues, circMSH3 expression was 4.487-fold higher in CRC tissues. circMSH3 was also highly expressed in the HT-29 and LOVO CRC cell lines. The expression level of circMSH3 was associated with distant metastasis in CRC patients ( Conclusion: circMSH3 is a potential biomarker for the diagnosis of CRC and affects the distant metastasis of CRC. Multiple RNA-binding protein binds to circMSH3, and circMSH3 binds to miR-1276, miR-942-5p, and miR-409-3p, thereby affecting the expression of circMSH3.

Indexed as

Colorectal NeoplasmsMicroRNAsBiomarkersHT29 CellsHumansRNA, CircularBiomarkersMicroRNAsMIRN942 microRNA, humanRNA, CircularCircMSH3Colorectal cancerHsa_circ_0003761MiR-1276MiR-409-3pMiR-942-5pRNA-protein pull-down

Identifiers

PMID37953794
PMCPMC10637257
OpenAlexW4388462592

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.