Evidence map›Paper›PMID 37953261›Full record

ArticleBMC cancer2023

Evaluation of an eight marker-panel including long mononucleotide repeat markers to detect microsatellite instability in colorectal, gastric, and endometrial cancers.

Yousun Chung, Soo Kyung Nam, Ho Eun Chang, Cheol Lee, Gyeong Hoon Kang, Hye Seung Lee, Kyoung Un Park

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yousun ChungDepartment of Laboratory Medicine, Kangdong Sacred Heart Hospital, Seoul, Republic of Korea.
Soo Kyung NamDepartment of Interdisciplinary Program in Cancer Biology, Seoul National University College of Medicine, Seoul, Republic of Korea.
Ho Eun ChangDepartment of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Cheol LeeDepartment of Pathology, Seoul National University College of Medicine, Seoul, Republic of Korea.
Gyeong Hoon KangDepartment of Pathology, Seoul National University College of Medicine, Seoul, Republic of Korea.
Hye Seung LeeDepartment of Pathology, Seoul National University College of Medicine, Seoul, Republic of Korea. hye2@snu.ac.kr.
Kyoung Un ParkDepartment of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea. m91w95pf@snu.ac.kr.
Seoul National University · KRKangdong Sacred Heart Hospital · KR

Funding

Ministry of SMEs and Startups (MSS, Korea) Technology Development Program (S2638360)
6 · The paper itself

Abstract

backgroundAccurate determination of microsatellite instability (MSI) status is critical for optimal treatment in cancer patients. Conventional MSI markers can sometimes display subtle shifts that are difficult to interpret, especially in non-colorectal cases. We evaluated an experimental eight marker-panel including long mononucleotide repeat (LMR) markers for detection of MSI.

methodsThe eight marker-panel was comprised of five conventional markers (BAT-25, BAT-26, NR-21, NR-24, and NR-27) and three LMR markers (BAT-52, BAT-59 and BAT-62). MSI testing was performed against 300 specimens of colorectal, gastric, and endometrial cancers through PCR followed by capillary electrophoresis length analysis.

resultsThe MSI testing with eight marker-panel showed 99.3% (295/297) concordance with IHC analysis excluding 3 MMR-focal deficient cases. The sensitivity of BAT-59 and BAT-62 was higher than or comparable to that of conventional markers in gastric and endometrial cancer. The mean shift size was larger in LMR markers compared to conventional markers for gastric and endometrial cancers.

conclusionsThe MSI testing with eight maker-panel showed comparable performance with IHC analysis. The LMR markers, especially BAT-59 and BAT-62, showed high sensitivity and large shifts which can contribute to increased confidence in MSI classification, especially in gastric and endometrial cancers. Further study is needed with large number of samples for the validation of these LMR markers.

Indexed as

Colorectal NeoplasmsEndometrial NeoplasmsBrain NeoplasmsFemaleHumansMicrosatellite InstabilityMicrosatellite RepeatsNeoplastic Syndromes, HereditaryColorectal cancerEndometrial cancerGastric cancerLong mononucleotide repeat markerMicrosatellite instability

Identifiers

PMID37953261
PMCPMC10641958
OpenAlexW4388616390

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.