Evidence map›Paper›PMID 37953224›Full record

ArticleBMC biology2023

Expression profiles of the autism-related SHANK proteins in the human brain.

Sarah Woelfle, Maria T Pedro, Jan Wagner, Michael Schön, Tobias M Boeckers

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Autism patient-derived SHANK2BMolecular psychiatry · 2024
    Article
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sarah WoelfleInstitute for Anatomy and Cell Biology, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany.
Maria T PedroDepartment of Neurosurgery, Ulm University, Campus Günzburg, Lindenallee 2, 89312, Günzburg, Germany.
Jan WagnerDepartment of Neurology, Ulm University and Universitäts- and Rehabilitationskliniken Ulm, 89081, Ulm, Germany.
Michael Schön *Institute for Anatomy and Cell Biology, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany. michael.schoen@uni-ulm.de.
Tobias M Boeckers *Institute for Anatomy and Cell Biology, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany. tobias.boeckers@uni-ulm.de.ORCID 0000-0002-1486-8535
Universität Ulm · DEUniversity and Rehabilitation Clinics Ulm · DE

Funding

Deutsche Forschungsgemeinschaft SFB1506Innovative Medicines Initiative 777394Innovative Medicines Initiative 847818
6 · The paper itself

Abstract

backgroundSHANKs are major scaffolding proteins at postsynaptic densities (PSDs) in the central nervous system. Mutations in all three family members have been associated with neurodevelopmental disorders such as autism spectrum disorders (ASDs). Despite the pathophysiological importance of SHANK2 and SHANK3 mutations in humans, research on the expression of these proteins is mostly based on rodent model organisms.

resultsIn the present study, cellular and neuropil SHANK2 expression was analyzed by immunofluorescence (IF) staining of post mortem human brain tissue from four male individuals (19 brain regions). Mouse brains were analyzed in comparison to evaluate the degree of phylogenetic conservation. Furthermore, SHANK2 and SHANK3 isoform patterns were compared in human and mouse brain lysates. While isoform expression and subcellular distribution were largely conserved, differences in neuropil levels of SHANK2 were found by IF staining: Maximum expression was concordantly measured in the cerebellum; however, higher SHANK2 expression was detected in the human brainstem and thalamus when compared to mice. One of the lowest SHANK2 levels was found in the human amygdala, a moderately expressing region in mouse. Quantification of SHANK3 IF in mouse brains unveiled a distribution comparable to humans.

conclusionsIn summary, these data show that the overall expression pattern of SHANK is largely conserved in defined brain regions; however, differences do exist, which need to be considered in the translation of rodent studies. The summarized expression patterns of SHANK2 and SHANK3 should serve as a reference for future studies.

Indexed as

Autistic DisorderNerve Tissue ProteinsAnimalsBrainHippocampusHumansMaleMicePhylogenyProtein IsoformsNerve Tissue ProteinsProtein IsoformsSHANK2 protein, humanSHANK3 protein, humanAutism spectrum disordersBrain regionsPost mortem human brainProtein expressionSHANK2SHANK3

Identifiers

PMID37953224
PMCPMC10641957
OpenAlexW4388617497

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.