Evidence map›Paper›PMID 37951547›Full record

ArticleToxicology and applied pharmacology2023

Nickel-induced transcriptional memory in lung epithelial cells promotes interferon signaling upon nicotine exposure.

Xiaoru Zhang, Beatrix Bradford, Sahdev Baweja, Taotao Tan, Hyun-Wook Lee, Cynthia C Jose, Nicholas Kim, Manpreet Katari, Suresh Cuddapah

Open access · greenAbstract read
In one paragraph

Article in Toxicology and applied pharmacology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Xiaoru ZhangDivision of Environmental Medicine, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10010, USA.
Beatrix BradfordDivision of Environmental Medicine, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10010, USA.
Sahdev BawejaDivision of Environmental Medicine, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10010, USA; Center for Genomics and Systems Biology, Department of Biology, New York University, New York, NY 10003, USA.
Taotao TanCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, NY 10003, USA.
Hyun-Wook LeeDivision of Environmental Medicine, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10010, USA.
Cynthia C JoseDivision of Environmental Medicine, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10010, USA.
Nicholas KimDivision of Environmental Medicine, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10010, USA.
Manpreet KatariCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, NY 10003, USA. Electronic address: mkatari@nyu.edu.
Suresh CuddapahDivision of Environmental Medicine, Department of Medicine, New York University Grossman School of Medicine, New York, NY 10010, USA. Electronic address: suresh.cuddapah@nyulangone.org.
New York University · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
TRAINING PROGRAM IN ENVIRONMENTAL TOXICOLOGYT32ES007324 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CUDDAPAH, SURESH · 1999 to 2025
$5.8M
Integrative transcriptional and epigenomic modeling of xenobiotic-activated gene regulatory networksR01ES031937 · NIEHS · MICHIGAN STATE UNIVERSITY · PI BHATTACHARYA, SUDIN, CUDDAPAH, SURESH · 2020 to 2024
$2.4M
Persistent transcriptional changes induced by nickel through epigenetic alterationsR01ES031402 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI COSTA, MAX, CUDDAPAH, SURESH · 2020 to 2024
$2.1M
NCI NIH HHS P30 CA016087NIEHS NIH HHS R01 ES031402NIEHS NIH HHS R01 ES031937NIEHS NIH HHS T32 ES007324
6 · The paper itself

Abstract

Exposure to nickel, an environmental respiratory toxicant, is associated with lung diseases including asthma, pulmonary fibrosis, bronchitis and cancers. Our previous studies have shown that a majority of the nickel-induced transcriptional changes are persistent and do not reverse even after the termination of exposure. This suggested transcriptional memory, wherein the cell 'remembers' past nickel exposure. Transcriptional memory, due to which the cells respond more robustly to a previously encountered stimulus has been identified in a number of organisms. Therefore, transcriptional memory has been described as an adaptive mechanism. However, transcriptional memory caused by environmental toxicant exposures has not been well investigated. Moreover, how the transcriptional memory caused by an environmental toxicant might influence the outcome of exposure to a second toxicant has not been explored. In this study, we investigated whether nickel-induced transcriptional memory influences the outcome of the cell's response to a second respiratory toxicant, nicotine. Nicotine, an addictive compound in tobacco, is associated with the development of chronic lung diseases including chronic obstructive pulmonary disease (COPD) and pulmonary fibrosis. Our results show that nicotine exposure upregulated a subset of genes only in the cells previously exposed to nickel. Furthermore, our analyses indicate robust activation of interferon (IFN) signaling in these cells. IFN signaling is a driver of inflammation, which is associated with many chronic lung diseases. Therefore, our results suggest that nicotine exposure of lung cells that retain the transcriptional memory of previous nickel exposure could result in increased susceptibility to developing chronic inflammatory lung diseases.

Indexed as

NickelPulmonary FibrosisEpithelial CellsHumansInterferonsLungNicotineInterferonsNickelNicotineInterferon signalingNickelNicotineSTAT1Transcriptional memory

Identifiers

PMID37951547
PMCPMC11065478
OpenAlexW4388571169

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.