Evidence map›Paper›PMID 37948446›Full record

ArticleJournal of chemical theory and computation2023

Robustness of Local Predictions in Atomistic Machine Learning Models.

Sanggyu Chong, Federico Grasselli, Chiheb Ben Mahmoud, Joe D Morrow, Volker L Deringer, Michele Ceriotti

Abstract read
In one paragraph

Article in Journal of chemical theory and computation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. The Zintl-Klemm Concept in the Amorphous State: A Case Study of Na-P Battery Anodes.Angewandte Chemie (International ed. in English) · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Analyzing Atomic Interactions in Molecules as Learned by Neural Networks.Journal of chemical theory and computation · 2025
    Article
  9. Article
  10. Article
  11. SPAJournal of chemical theory and computation · 2024
    Article
  12. Mechanism of Charge Transport in Lithium Thiophosphate.Chemistry of materials : a publication of the American Chemical Society · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sanggyu ChongLaboratory of Computational Science and Modeling, Institute of Materials, École Polytechnique Fédérale de Lausanne, Lausanne 1015, Switzerland.ORCID 0000-0002-6948-1602
Federico GrasselliLaboratory of Computational Science and Modeling, Institute of Materials, École Polytechnique Fédérale de Lausanne, Lausanne 1015, Switzerland.ORCID 0000-0003-4284-0094
Chiheb Ben MahmoudLaboratory of Computational Science and Modeling, Institute of Materials, École Polytechnique Fédérale de Lausanne, Lausanne 1015, Switzerland.
Joe D MorrowDepartment of Chemistry, Inorganic Chemistry Laboratory, University of Oxford, Oxford OX1 3QR, U.K.
Volker L DeringerDepartment of Chemistry, Inorganic Chemistry Laboratory, University of Oxford, Oxford OX1 3QR, U.K.ORCID 0000-0001-6873-0278
Michele CeriottiLaboratory of Computational Science and Modeling, Institute of Materials, École Polytechnique Fédérale de Lausanne, Lausanne 1015, Switzerland.ORCID 0000-0003-2571-2832

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Machine learning (ML) models for molecules and materials commonly rely on a decomposition of the global target quantity into local, atom-centered contributions. This approach is convenient from a computational perspective, enabling large-scale ML-driven simulations with a linear-scaling cost and also allows for the identification and posthoc interpretation of contributions from individual chemical environments and motifs to complicated macroscopic properties. However, even though practical justifications exist for the local decomposition, only the global quantity is rigorously defined. Thus, when the atom-centered contributions are used, their sensitivity to the training strategy or the model architecture should be carefully considered. To this end, we introduce a quantitative metric, which we call the local prediction rigidity (LPR), that allows one to assess how robust the locally decomposed predictions of ML models are. We investigate the dependence of the LPR on the aspects of model training, particularly the composition of training data set, for a range of different problems from simple toy models to real chemical systems. We present strategies to systematically enhance the LPR, which can be used to improve the robustness, interpretability, and transferability of atomistic ML models.

Identifiers

PMID37948446
PMCPMC10688186

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.