Evidence map›Paper›PMID 37947852›Full record

ArticleJournal of molecular medicine (Berlin, Germany)2024

Two-trace two-dimensional correlation spectra (2T2D-COS) analysis using FTIR spectra to monitor the immune response by COVID-19.

Sivakumaran Karthikeyan, Gustavo J Vazquez-Zapien, Adriana Martinez-Cuazitl, Raul J Delgado-Macuil, Daniel E Rivera-Alatorre, Francisco Garibay-Gonzalez, Josemaria Delgado-Gonzalez, Daniel Valencia-Trujillo, Melissa Guerrero-Ruiz, Consuelo Atriano-Colorado and 3 more

Abstract read
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In one paragraph

Article in Journal of molecular medicine (Berlin, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 6 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Sivakumaran KarthikeyanDepartment of Physics, Dr. Ambedkar Government Arts College, Chennai, Tamil Nadu, 600039, India. physicskarthik@gmail.com.ORCID 0000-0002-2874-3987
Gustavo J Vazquez-ZapienCentro de Investigación y Desarrollo del Ejército y Fuerza Aérea Mexicanos, Secretaría de la Defensa Nacional, Mexico City, 11400, Mexico. gus1202@hotmail.com.ORCID 0000-0002-6657-0722
Adriana Martinez-CuazitlEscuela Militar de Medicina, Centro Militar de Ciencias de la Salud, Secretaría de la Defensa Nacional, Mexico City, 11200, Mexico.ORCID 0000-0002-1849-5190
Raul J Delgado-MacuilCentro de Investigación en Biotecnología Aplicada, Instituto Politécnico Nacional, Tlaxcala, 90700, Mexico.ORCID 0000-0003-3934-6036
Daniel E Rivera-AlatorreCentro de Investigación y Desarrollo del Ejército y Fuerza Aérea Mexicanos, Secretaría de la Defensa Nacional, Mexico City, 11400, Mexico.
Francisco Garibay-GonzalezEscuela Militar de Medicina, Centro Militar de Ciencias de la Salud, Secretaría de la Defensa Nacional, Mexico City, 11200, Mexico.ORCID 0000-0002-1071-5208
Josemaria Delgado-GonzalezEscuela Militar de Medicina, Centro Militar de Ciencias de la Salud, Secretaría de la Defensa Nacional, Mexico City, 11200, Mexico.
Daniel Valencia-TrujilloServicio de Microbiología Clínica, Instituto Nacional de Enfermedades Respiratorias, Mexico City, 14080, Mexico.ORCID 0000-0002-7436-3782
Melissa Guerrero-RuizEscuela Militar de Medicina, Centro Militar de Ciencias de la Salud, Secretaría de la Defensa Nacional, Mexico City, 11200, Mexico.ORCID 0000-0002-8078-3353
Consuelo Atriano-ColoradoEscuela Militar de Medicina, Centro Militar de Ciencias de la Salud, Secretaría de la Defensa Nacional, Mexico City, 11200, Mexico.ORCID 0009-0000-7790-9157
Alberto Lopez-ReyesLaboratorio de Gerociencias, Instituto Nacional de Rehabilitación Luis Guillermo Ibarra Ibarra, Secretaría de Salud, Mexico City, 14389, Mexico.ORCID 0000-0002-2575-2589
Dante J Lopez-MezquitaHospital Central Militar, Secretaría de la Defensa Nacional, Mexico City, 11200, Mexico.
Monica M Mata-MirandaEscuela Militar de Medicina, Centro Militar de Ciencias de la Salud, Secretaría de la Defensa Nacional, Mexico City, 11200, Mexico. mmcmaribel@gmail.com.ORCID 0000-0002-1811-4511
Secretaría de la Defensa NacionalUniversidad del Ejército y Fuerza Aérea · MXInstituto Nacional de Enfermedades Respiratorias · MXInstituto Politécnico Nacional · MXSecretaria de Salud · MXTamil Nadu Dr. Ambedkar Law University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is a growing trend in using saliva for SARS-CoV-2 detection with reasonable accuracy. We have studied the responses of IgA, IgG, and IgM in human saliva by directly comparing disease with control analyzing two-trace two-dimensional correlation spectra (2T2D-COS) employing Fourier transform infrared (FTIR) spectra. It explores the molecular-level variation between control and COVID-19 saliva samples. The advantage of 2T2D spectra is that it helps in discriminating remarkably subtle features between two simple pairs of spectra. It gives spectral information from highly overlapped bands associated with different systems. The clinical findings from 2T2D show the decrease of IgG and IgM salivary antibodies in the 50, 60, 65, and 75-years COVID-19 samples. Among the various COVID-19 populations studied the female 30-years group reveals defense mechanisms exhibited by IgM and IgA. Lipids and fatty acids decrease, resulting in lipid oxidation due to the SARS-CoV-2 in the samples studied. Study shows salivary thiocyanate plays defense against SARS-CoV-2 in the male population in 25 and 35 age groups. The receiver operation characteristics statistical method shows a sensitivity of 98% and a specificity of 94% for the samples studied. The measure of accuracy computed as F score and G score has a high value, supporting our study's validation. Thus, 2T2D-COS analysis can potentially monitor the progression of immunoglobulin's response function to COVID-19 with reasonable accuracy, which could help diagnose clinical trials. KEY MESSAGES: The molecular profile of salivary antibodies is well resolved and identified from 2T2D-COS FTIR spectra. The IgG antibody plays a significant role in the defense mechanism against SARS-CoV-2 in 25-40 years. 2T2D-COS reveals the absence of salivary thiocyanate in the 40-75 years COVID-19 population. The receiver operation characteristic (ROC) analysis validates our study with high sensitivity and specificity.

Indexed as

COVID-19FemaleFourier AnalysisHumansImmunityImmunoglobulin AImmunoglobulin GImmunoglobulin MMaleSARS-CoV-2Spectroscopy, Fourier Transform InfraredThiocyanatesImmunoglobulin AImmunoglobulin GImmunoglobulin MthiocyanateThiocyanates2T2D-COSAntibodyCOVID-19FTIRROCSaliva

Identifiers

PMID37947852
OpenAlexW4388573536

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.