Evidence map›Paper›PMID 37945901›Full record

ArticleNature genetics2023

Transcriptional and epigenetic regulators of human CD8

Sean R McCutcheon, Adam M Swartz, Michael C Brown, Alejandro Barrera, Christian McRoberts Amador, Keith Siklenka, Lucas Humayun, Maria A Ter Weele, James M Isaacs, Timothy E Reddy and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Nature genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
15.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Mapping the clinical landscape of multifunctional CAR T cells: Targets, trends, and synergies.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Pooled it
  2. Article
  3. Article
  4. Review
  5. Epigenetic insights and innovations for overcoming barriers in CAR-T cell therapy for cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Review
  6. Article
  7. Article
  8. All-trans retinoic acid suppresses CD8Signal transduction and targeted therapy · 2026
    Article
  9. Article
  10. Review
  11. Article
  12. BATF3 regulates differentiation of CD8Life science alliance · 2026
    Article
  13. Article
  14. Review
  15. Clinical translation of epigenome editing technologies.Current opinion in biomedical engineering · 2026
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Enhancer hubs govern chromatin topology and Th17 cell identity.bioRxiv : the preprint server for biology · 2026
    Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Sean R McCutcheonDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.
Adam M SwartzDepartment of Surgery, Duke University Medical Center, Durham, NC, USA.
Michael C BrownDepartment of Neurosurgery, Duke University School of Medicine, Durham, NC, USA.
Alejandro BarreraCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.ORCID 0000-0001-9244-9822
Christian McRoberts AmadorCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Keith SiklenkaCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Lucas HumayunDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.ORCID 0000-0003-4624-2550
Maria A Ter WeeleDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.
James M IsaacsDuke Cancer Institute Center for Cancer Immunotherapy, Duke University School of Medicine, Durham, NC, USA.
Timothy E ReddyDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.ORCID 0000-0002-7629-061X
Andrew S AllenCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Smita K NairDepartment of Surgery, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0001-7019-1912
Scott J AntoniaDuke Cancer Institute Center for Cancer Immunotherapy, Duke University School of Medicine, Durham, NC, USA.
Charles A GersbachDepartment of Biomedical Engineering, Duke University, Durham, NC, USA. charles.gersbach@duke.edu.ORCID 0000-0003-1478-4013
Duke University · USDuke Medical Center · US

Funding

The Duke FUNCTION Center: Pioneering the comprehensive identification of combinatorial noncoding causes of diseaseRM1HG011123 · NHGRI · DUKE UNIVERSITY · PI GREGORY E CRAWFORD, Raluca Gordan · 2020 to 2026
$21.9M
High-Throughput Functional Annotation of Gene Regulatory Elements and Variants Critical to Complex Cellular PhenotypesUM1HG012053 · NHGRI · DUKE UNIVERSITY · PI GREGORY E CRAWFORD, Charles A. Gersbach · 2021 to 2026
$10.7M
The function and regulation of the novel pregnancy-specific hexokinase HKDC1R01DK104927 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LAYDEN, BRIAN THOMAS, REDDY, TIMOTHY E · 2015 to 2024
$7.2M
Regulatory Mechanisms of CD4+ T Cell DifferentiationUM1HG009428 · NHGRI · DUKE UNIVERSITY · PI CIOFANI, MARIA, CRAWFORD, GREGORY E · 2017 to 2021
$4.6M
Design, prediction, and prioritization of systematic perturbations of the human genomeU01HG011967 · NHGRI · DUKE UNIVERSITY · PI ANDREW S ALLEN, William Majoros · 2021 to 2026
$3.9M
University Training Program in Biomolecular and Tissue EngineeringT32GM144291 · NIGMS · DUKE UNIVERSITY · PI Charles A. Gersbach, Tatiana Segura · 2022 to 2026
$2.6M
Epigenome Editing Technologies for Treating Diverse DiseaseU01AI146356 · NIAID · DUKE UNIVERSITY · PI GERSBACH, CHARLES A. · 2019 to 2022
$1.6M
Reviving cancer immune surveillance with CD4 T cell helpK99CA263021 · NCI · DUKE UNIVERSITY · PI BROWN, MICHAEL CLAVON · 2021 to 2021
$105k
NCI NIH HHS K99 CA263021NHGRI NIH HHS RM1 HG011123NHGRI NIH HHS U01 HG011967NHGRI NIH HHS UM1 HG009428NHGRI NIH HHS UM1 HG012053NIAID NIH HHS U01 AI146356NIDDK NIH HHS R01 DK104927NIGMS NIH HHS T32 GM144291
6 · The paper itself

Abstract

Clinical response to adoptive T cell therapies is associated with the transcriptional and epigenetic state of the cell product. Thus, discovery of regulators of T cell gene networks and their corresponding phenotypes has potential to improve T cell therapies. Here we developed pooled, epigenetic CRISPR screening approaches to systematically profile the effects of activating or repressing 120 transcriptional and epigenetic regulators on human CD8

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsNeoplasmsCD8-Positive T-LymphocytesEpigenesis, GeneticHumans

Identifiers

PMID37945901
PMCPMC10703699
OpenAlexW4388541085

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.