Evidence map›Paper›PMID 37945696›Full record

ArticleNature plants2023

A tRNA-modifying enzyme facilitates RNase P activity in Arabidopsis nuclei.

Mathilde Arrivé, Mathieu Bruggeman, Vasileios Skaltsogiannis, Léna Coudray, Yi-Fat Quan, Cédric Schelcher, Valérie Cognat, Philippe Hammann, Johana Chicher, Philippe Wolff and 2 more

Abstract read
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In one paragraph

Article in Nature plants, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Review
  3. The landscape of Arabidopsis tRNA aminoacylation.The Plant journal : for cell and molecular biology · 2024
    Article
  4. Article
  5. RNA modifying enzymes shape tRNA biogenesis and function.The Journal of biological chemistry · 2024
    Review
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 2 countries.

Mathilde Arrivé *Institut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.
Mathieu Bruggeman *Institut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.
Vasileios Skaltsogiannis *Institut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.ORCID http://orcid.org/0000-0003-4155-9540
Léna Coudray *Institut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.
Yi-Fat QuanInstitut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.
Cédric SchelcherInstitut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.
Valérie CognatInstitut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.ORCID http://orcid.org/0000-0001-9337-2767
Philippe HammannPlateforme protéomique Strasbourg Esplanade, FR1589 du CNRS, Strasbourg, France.ORCID http://orcid.org/0000-0002-6883-9203
Johana ChicherPlateforme protéomique Strasbourg Esplanade, FR1589 du CNRS, Strasbourg, France.ORCID http://orcid.org/0000-0002-4403-7484
Philippe WolffPlateforme protéomique Strasbourg Esplanade, FR1589 du CNRS, Strasbourg, France.
Anthony GobertInstitut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France.ORCID http://orcid.org/0000-0003-2626-8788
Philippe GiegéInstitut de biologie moléculaire des plantes, UPR2357 du CNRS, Université de Strasbourg, Strasbourg, France. giege@unistra.fr.ORCID http://orcid.org/0000-0003-2285-8190
Centre National de la Recherche Scientifique · FR

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-22-CE12-0008-01
6 · The paper itself

Abstract

RNase P is the essential activity that performs the 5' maturation of transfer RNA (tRNA) precursors. Beyond the ancestral form of RNase P containing a ribozyme, protein-only RNase P enzymes termed PRORP were identified in eukaryotes. In human mitochondria, PRORP forms a complex with two protein partners to become functional. In plants, although PRORP enzymes are active alone, we investigate their interaction network to identify potential tRNA maturation complexes. Here we investigate functional interactions involving the Arabidopsis nuclear RNase P PRORP2. We show, using an immuno-affinity strategy, that PRORP2 occurs in a complex with the tRNA methyl transferases TRM1A and TRM1B in vivo. Beyond RNase P, these enzymes can also interact with RNase Z. We show that TRM1A/TRM1B localize in the nucleus and find that their double knockout mutation results in a severe macroscopic phenotype. Using a combination of immuno-detections, mass spectrometry and a transcriptome-wide tRNA sequencing approach, we observe that TRM1A/TRM1B are responsible for the m

Indexed as

ArabidopsisArabidopsis ProteinsHumansRibonuclease PRNA Processing, Post-TranscriptionalRNA, TransferArabidopsis ProteinsRibonuclease PRNA, Transfer

Identifiers

PMID37945696
OpenAlexW4388523176

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.