Evidence map›Paper›PMID 37945626›Full record

ArticleScientific reports2023

Categorization of collagen type I and II blend hydrogel using multipolarization SHG imaging with ResNet regression.

Anupama Nair, Chun-Yu Lin, Feng-Chun Hsu, Ta-Hsiang Wong, Shu-Chun Chuang, Yi-Shan Lin, Chung-Hwan Chen, Paul Campagnola, Chi-Hsiang Lien, Shean-Jen Chen

Abstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Anupama NairCollege of Photonics, National Yang Ming Chiao Tung University, Tainan, Taiwan.
Chun-Yu LinCollege of Photonics, National Yang Ming Chiao Tung University, Tainan, Taiwan.
Feng-Chun HsuCollege of Photonics, National Yang Ming Chiao Tung University, Tainan, Taiwan.
Ta-Hsiang WongDepartment of Medical Education, National Taiwan University Hospital, Taipei, Taiwan.
Shu-Chun ChuangOrthopaedic Research Center, Kaohsiung Medical University, Kaohsiung, Taiwan.
Yi-Shan LinOrthopaedic Research Center, Kaohsiung Medical University, Kaohsiung, Taiwan.
Chung-Hwan ChenOrthopaedic Research Center, Kaohsiung Medical University, Kaohsiung, Taiwan. hwan@kmu.edu.tw.
Paul CampagnolaDepartment of Biomedical Engineering, College of Engineering, University of Wisconsin-Madison, Madison, WI, USA.
Chi-Hsiang LienDepartment of Mechanical Engineering, National United University, Miaoli, Taiwan. chlien33@nuu.edu.tw.
Shean-Jen ChenCollege of Photonics, National Yang Ming Chiao Tung University, Tainan, Taiwan. sheanjen@nycu.edu.tw.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previously, the discrimination of collagen types I and II was successfully achieved using peptide pitch angle and anisotropic parameter methods. However, these methods require fitting polarization second harmonic generation (SHG) pixel-wise information into generic mathematical models, revealing inconsistencies in categorizing collagen type I and II blend hydrogels. In this study, a ResNet approach based on multipolarization SHG imaging is proposed for the categorization and regression of collagen type I and II blend hydrogels at 0%, 25%, 50%, 75%, and 100% type II, without the need for prior time-consuming model fitting. A ResNet model, pretrained on 18 progressive polarization SHG images at 10° intervals for each percentage, categorizes the five blended collagen hydrogels with a mean absolute error (MAE) of 0.021, while the model pretrained on nonpolarization images exhibited 0.083 MAE. Moreover, the pretrained models can also generally regress the blend hydrogels at 20%, 40%, 60%, and 80% type II. In conclusion, the multipolarization SHG image-based ResNet analysis demonstrates the potential for an automated approach using deep learning to extract valuable information from the collagen matrix.

Indexed as

Collagen Type IHydrogelsCollagenDiagnostic ImagingImage Processing, Computer-AssistedCollagenCollagen Type IHydrogels

Identifiers

PMID37945626
PMCPMC10636134

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.