Evidence map›Paper›PMID 37943378›Full record

ArticlePlanta2023

Identification and functional characterization of two trans-isopentenyl diphosphate synthases and one squalene synthase involved in triterpenoid biosynthesis in Platycodon grandiflorus.

Hanwen Yu, Bowen Chen, Jing Li, Nan Dong, Xiangwei Chang, Jutao Wang, Huasheng Peng, Liangping Zha, Shuangying Gui

Abstract read
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In one paragraph

Article in Planta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Hanwen Yu *College of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Bowen Chen *College of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Jing LiCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Nan DongCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Xiangwei ChangCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Jutao WangCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Huasheng PengCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Liangping ZhaCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China. zlp_ahtcm@126.com.ORCID http://orcid.org/0000-0002-4644-5852
Shuangying GuiCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China. guishy0520@ahtcm.edu.cn.
Anhui University of Traditional Chinese Medicine · CNChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

Excellent Young Scholars Project of Natural Science Foundation of Anhui Province in China 2208085Y30Key project at central government level: The ability establishment of sustainable use for valuable Chinese medicine resources 2060302National Natural Science Foundation of China U21A20406Science Research Project at the Universities of Anhui Province for Distinguished Young Scholars 2023AH020036
6 · The paper itself

Abstract

MAIN

conclusionTwo trans-isopentenyl diphosphate synthase and one squalene synthase genes were identified and proved to be involved in the triterpenoid biosynthesis in Platycodon grandiflorus. Platycodon grandiflorus is a commonly used traditional Chinese medicine. The main bioactive compounds of P. grandiflorus are triterpenoid saponins. The biosynthetic pathway of triterpenoid saponins in P. grandiflorus has been preliminarily explored. However, limited functional information on related genes has been reported. A total of three trans-isopentenyl diphosphate synthases (trans-IDSs) genes (PgFPPS, PgGGPPS1 and PgGGPPS2) and one squalene synthase (SQS) gene (PgSQS) in P. grandiflorus were screened and identified from transcriptome dataset. Subcellular localization of the proteins was defined based on the analysis of GFP-tagged. The activity of genes was verified in Escherichia coli, demonstrating that recombinant PgFPPS catalysed the production of farnesyl diphosphate. PgGGPPS1 produced geranylgeranyl diphosphate, whereas PgGGPPS2 did not exhibit catalytic activity. By structural identification of encoding genes, a transmembrane region was found at the C-terminus of the PgSQS gene, which produced an insoluble protein when expressed in E. coli but showed no apparent effect on the enzyme function. Furthermore, some triterpenoid saponin synthesis-related genes were discovered by combining the component content and the gene expression assays at the five growth stages of P. grandiflorus seedlings. The accumulation of active components in P. grandiflorus was closely associated with the expression level of genes related to the synthesis pathway.

Indexed as

PlatycodonSaponinsEscherichia coliFarnesyl-Diphosphate FarnesyltransferaseHemiterpenesOrganophosphorus CompoundsFarnesyl-Diphosphate FarnesyltransferaseHemiterpenesisopentenyl pyrophosphateOrganophosphorus CompoundsSaponinsGene characterizationPlatycodon grandiflorusSqualene synthaseTrans-isopentenyl diphosphate synthaseTriterpenoid biosynthesis

Identifiers

PMID37943378
OpenAlexW4388532591

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.