Evidence map›Paper›PMID 37942557›Full record

ArticleJournal of industrial microbiology & biotechnology2023

Characterization of the off-flavor from Pichia pastoris GS115 during the overexpression of an α-l-rhamnosidase.

YuXuan Yao, ShengLan Zheng, ShiLin Chi, Feng Chen, Ning Cai, ZhenZhen Cai, Zhipeng Li, Hui Ni

Open access · goldAbstract read
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

YuXuan YaoCollege of Ocean Food and Biological Engineering, Jimei University, Xiamen 361021, People's Republic of China.ORCID 0000-0002-5970-4745
ShengLan ZhengCollege of Ocean Food and Biological Engineering, Jimei University, Xiamen 361021, People's Republic of China.
ShiLin ChiCollege of Ocean Food and Biological Engineering, Jimei University, Xiamen 361021, People's Republic of China.
Feng ChenDepartment of Food, Nutrition and Packaging Sciences, Clemson University, Clemson, SC 29634, USA.
Ning CaiXiamen Ocean Vocational College, Xiamen, Fujian 361021, People's Republic of China.
ZhenZhen CaiXiamen Ocean Vocational College, Xiamen, Fujian 361021, People's Republic of China.
Zhipeng LiCollege of Ocean Food and Biological Engineering, Jimei University, Xiamen 361021, People's Republic of China.
Hui NiCollege of Ocean Food and Biological Engineering, Jimei University, Xiamen 361021, People's Republic of China.ORCID 0000-0001-5827-1717
Jimei University · CNFujian Institute of Oceanography · CNClemson University · US

Funding

National Natural Science Foundation of China 32172339
6 · The paper itself

Abstract

The off-flavor of Pichia pastoris strains is a negative characteristic of proteins overexpressed with this yeast. In the present study, P. pastoris GS115 overexpressing an α-l-rhamnosidase was taken as the example to characterize the off-flavor via sensory evaluation, gas chromatography-mass spectrometer, gas chromatography-olfaction, and omission test. The result showed that the off-flavor was due to the strong sweaty note, and moderate metallic and plastic notes. Four volatile compounds, that is, tetramethylpyrazine, 2,4-di-tert-butylphenol, isovaleric acid, and 2-methylbutyric acid, were identified to be major contributors to the sweaty note. Dodecanol and 2-acetylbutyrolactone were identified to be contributors to the metallic and plastic notes, respectively. It is the first study on the off-flavor of P. pastoris strains, helping understand metabolites with off-flavor of this yeast. Interestingly, it is the first study illustrating 2-acetylbutyrolactone and dodecanol with plastic and metallic notes, providing new information about the aromatic contributors of biological products. IMPORTANCE: The methylotrophic yeast Pichia pastoris is an important host for the industrial expression of functional proteins. In our previous studies, P. pastoris strains have been sniffed with a strong off-flavor during the overexpression of various functional proteins, limiting the application of these proteins. Although many yeast strains have been reported with off-flavor, no attention has been paid to characterize the off-flavor in P. pastoris so far. Considering that P. pastoris has advantages over other established expression systems of functional proteins, it is of interest to identify the compounds with off-flavor synthesized in the overexpression of functional proteins with P. pastoris strains. In this study, the off-flavor synthesized from P. pastoris GS115 was characterized during the overexpression of an α-l-rhamnosidase, which helps understand the aromatic metabolites with off-flavor of P. pastoris strains. In addition, 2-acetylbutyrolactone and dodecanol were newly revealed with plastic and metallic notes, enriching the aromatic contributors of biological products. Thus, this study is important for understanding the metabolites with off-flavor of P. pastoris strains and other organisms, providing important knowledge to improve the flavor of products yielding with P. pastoris strains and other organisms. ONE-SENTENCE SUMMARY: Characterize the sensory and chemical profile of the off-flavor produced by one strain of P. pastoris in vitro.

Indexed as

Biological ProductsSaccharomyces cerevisiae4-ButyrolactoneDodecanolGlycoside HydrolasesPichiaRecombinant ProteinsSaccharomycetales2-acetylbutyrolactone4-Butyrolactonealpha-L-rhamnosidaseBiological ProductsDodecanolGlycoside HydrolasesRecombinant ProteinsGC–MS analysisOff-flavorPichia pastoris

Identifiers

PMID37942557
PMCPMC10696632
OpenAlexW4388515714

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.