Evidence map›Paper›PMID 37940921›Full record

ArticleBiomedical engineering online2023

A combined encoder-transformer-decoder network for volumetric segmentation of adrenal tumors.

Liping Wang, Mingtao Ye, Yanjie Lu, Qicang Qiu, Zhongfeng Niu, Hengfeng Shi, Jian Wang

Abstract read
In one paragraph

Article in Biomedical engineering online, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

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2citing papers in PubMed, 1 pooled it
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2 citing papers in PubMed, 1 synthesis or guideline pooled it.

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5 · Who and what money

Authors and funding

7 authors.

Liping Wang *College of Computer Science and Technology, Zhejiang University of Technology, Hangzhou, Zhejiang, China.
Mingtao Ye *College of Computer Science and Technology, Zhejiang University of Technology, Hangzhou, Zhejiang, China.
Yanjie LuCollege of Computer Science and Technology, Zhejiang University of Technology, Hangzhou, Zhejiang, China.
Qicang QiuZhejiang Lab, No. 1818, Western Road of Wenyi, Hangzhou, Zhejiang, China. qiuqc@zhejianglab.com.
Zhongfeng NiuDepartment of Radiology, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China.
Hengfeng ShiDepartment of Radiology, Anqing Municipal Hospital, Anqing, Anhui, China.
Jian WangDepartment of Radiology, Tongde Hospital of Zhejiang Province, No.234, Gucui Road, Hangzhou, Zhejiang, China. 119202405@qq.com.

Funding

Natural Science Foundation of Zhejiang Province LQ20F020014
6 · The paper itself

Abstract

backgroundThe morphology of the adrenal tumor and the clinical statistics of the adrenal tumor area are two crucial diagnostic and differential diagnostic features, indicating precise tumor segmentation is essential. Therefore, we build a CT image segmentation method based on an encoder-decoder structure combined with a Transformer for volumetric segmentation of adrenal tumors.

methodsThis study included a total of 182 patients with adrenal metastases, and an adrenal tumor volumetric segmentation method combining encoder-decoder structure and Transformer was constructed. The Dice Score coefficient (DSC), Hausdorff distance, Intersection over union (IOU), Average surface distance (ASD) and Mean average error (MAE) were calculated to evaluate the performance of the segmentation method.

resultsAnalyses were made among our proposed method and other CNN-based and transformer-based methods. The results showed excellent segmentation performance, with a mean DSC of 0.858, a mean Hausdorff distance of 10.996, a mean IOU of 0.814, a mean MAE of 0.0005, and a mean ASD of 0.509. The boxplot of all test samples' segmentation performance implies that the proposed method has the lowest skewness and the highest average prediction performance.

conclusionsOur proposed method can directly generate 3D lesion maps and showed excellent segmentation performance. The comparison of segmentation metrics and visualization results showed that our proposed method performed very well in the segmentation.

Indexed as

Adrenal Gland NeoplasmsNeural Networks, ComputerHumansImage Processing, Computer-AssistedAdrenal metastasesAdrenal tumor volumetric segmentationComputer-aided diagnostic toolTransformer

Identifiers

PMID37940921
PMCPMC10631161

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