Evidence map›Paper›PMID 37940730›Full record

ArticleArchives of microbiology2023

Cellulomonas endometrii sp. nov.: a novel bacterium isolated from the endometrial microbiota.

Linda Abou Chacra, Marion Bonnet, Mégane Heredia, Gabriel Haddad, Nicholas Armstrong, Stéphane Alibar, Florence Bretelle, Florence Fenollar

Open access · hybridAbstract read
In one paragraph

Article in Archives of microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Linda Abou ChacraAix-Marseille Université, IRD, AP-HM, SSA, VITROME, Marseille, France.
Marion BonnetAix-Marseille Université, IRD, AP-HM, SSA, VITROME, Marseille, France.
Mégane HerediaAix-Marseille Université, IRD, AP-HM, SSA, VITROME, Marseille, France.
Gabriel HaddadIHU-Méditerranée Infection, Marseille, France.
Nicholas ArmstrongAix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France.
Stéphane AlibarIHU-Méditerranée Infection, Marseille, France.
Florence BretelleAix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France.
Florence FenollarAix-Marseille Université, IRD, AP-HM, SSA, VITROME, Marseille, France. florence.fenollar@univ-amu.fr.
Institut de Recherche pour le Développement · FRMéditerranée Infection Foundation · FRAix-Marseille Université · FRHôpital de la Conception · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An isolate of a bacterium recovered from an endometrial biopsy failed to be identified by MALDI-TOF mass spectrometry and was subjected to 16S rRNA sequencing. The obtained sequence was compared by BLASTn against the NCBI database, which revealed that the most closely related species was Cellulomonas hominis and Cellulomonas pakistanensis, with 98.85% and 98.45% identity, respectively. Phenotypic characterisation and genome sequencing were performed. The isolate was facultative anaerobic, gram-positive, motile, non-spore forming, and rod-shaped. Cell wall fatty acid profiling revealed that 12-methyl-tetradecanoic acid was the most abundant fatty acid (36%). The genome size was 4.25 Mbp with a G + C content of 74.8 mol%. Genomic comparison of species closely related to this strain showed that all digital DNA-DNA hybridisation (dDDH) and mean orthologous nucleotide identity (OrthoANI) values were below published species thresholds (70% and 95-96%, respectively). Based on these data, we conclude that this isolate represents a new bacterial species belonging to the family Cellulomonadaceae and the phylum Actinomycetota. We propose the name Cellulomonas endometrii sp. nov. The type strain is Marseille-Q7820

Indexed as

CellulomonasBacterial Typing TechniquesDNA, BacterialFatty AcidsPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialFatty AcidsRNA, Ribosomal, 16SAnaerobicCellulomonas endometrii sp. nov.Endometrial microbiotaEndometritisHuman microbiotaNew bacterial speciesTaxonomy

Identifiers

PMID37940730
PMCPMC10632280
OpenAlexW4388501611

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.