Evidence map›Paper›PMID 37939083›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

In vivo selection of synthetic nucleocapsids for tissue targeting.

Audrey Olshefsky, Halli Benasutti, Meilyn Sylvestre, Gabriel L Butterfield, Gabriel J Rocklin, Christian Richardson, Derrick R Hicks, Marc J Lajoie, Kefan Song, Elizabeth Leaf and 9 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Audrey OlshefskyDepartment of Bioengineering, University of Washington, Seattle, WA 98195.ORCID 0000-0002-4028-5587
Halli BenasuttiDepartment of Biochemistry, University of Washington, Seattle, WA 98195.ORCID 0000-0003-1676-5799
Meilyn SylvestreDepartment of Bioengineering, University of Washington, Seattle, WA 98195.
Gabriel L ButterfieldInstitute for Protein Design, University of Washington, Seattle, WA 98195.
Gabriel J RocklinInstitute for Protein Design, University of Washington, Seattle, WA 98195.
Christian RichardsonDepartment of Bioengineering, University of Washington, Seattle, WA 98195.
Derrick R HicksInstitute for Protein Design, University of Washington, Seattle, WA 98195.ORCID 0000-0003-2950-1848
Marc J LajoieInstitute for Protein Design, University of Washington, Seattle, WA 98195.ORCID 0000-0002-0477-5511
Kefan SongDepartment of Bioengineering, University of Washington, Seattle, WA 98195.
Elizabeth LeafInstitute for Protein Design, University of Washington, Seattle, WA 98195.ORCID 0000-0002-5354-6010
Catherine TreichelInstitute for Protein Design, University of Washington, Seattle, WA 98195.
Justin DecarreauInstitute for Protein Design, University of Washington, Seattle, WA 98195.ORCID 0000-0001-8996-7741
Sharon KeInstitute for Protein Design, University of Washington, Seattle, WA 98195.
Gargi KherInstitute for Protein Design, University of Washington, Seattle, WA 98195.
Lauren CarterInstitute for Protein Design, University of Washington, Seattle, WA 98195.ORCID 0000-0002-9837-9068
Jeffrey S ChamberlainDepartment of Biochemistry, University of Washington, Seattle, WA 98195.ORCID 0000-0001-5299-0059
David BakerInstitute for Protein Design, University of Washington, Seattle, WA 98195.ORCID 0000-0001-7896-6217
Neil P KingInstitute for Protein Design, University of Washington, Seattle, WA 98195.ORCID 0000-0002-2978-4692
Suzie H PunDepartment of Bioengineering, University of Washington, Seattle, WA 98195.ORCID 0000-0003-1443-4996

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Karin E Bornfeldt · 1986 to 2026
$41.4M
CHEETAH Center for the Structural Biology of HIV Infection, Restriction, and Viral DynamicsU54AI170856 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI WESLEY I. SUNDQUIST · 2022 to 2026
$34.4M
Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
DYSTROPHIN REPLACEMENT IN MDX MICER01AR040864 · NIAMS · UNIVERSITY OF WASHINGTON · PI JEFFREY S CHAMBERLAIN · 1991 to 2026
$8.8M
An integrated polymeric carrier for subunit cancer vaccinesR01CA257563 · NCI · UNIVERSITY OF WASHINGTON · PI PUN, SUZIE H., STAYTON, PATRICK S. · 2021 to 2025
$2.4M
Leica SP8 WWL Confocal MicroscopeS10OD016240 · OD · UNIVERSITY OF WASHINGTON · PI CATTERALL, WILLIAM A · 2014 to 2014
$581k
Synthetic nucleocapsids: a new peptide library platformR21CA232430 · NCI · UNIVERSITY OF WASHINGTON · PI KING, NEIL, PUN, SUZIE H. · 2018 to 2019
$366k
NCI NIH HHS R01 CA257563NCI NIH HHS R21 CA232430NCI NIH HHS T32 CA080416NIAID NIH HHS U54 AI170856NIAMS NIH HHS R01 AR040864NIDDK NIH HHS P30 DK017047NIH HHS S10 OD016240
6 · The paper itself

Abstract

Controlling the biodistribution of protein- and nanoparticle-based therapeutic formulations remains challenging. In vivo library selection is an effective method for identifying constructs that exhibit desired distribution behavior; library variants can be selected based on their ability to localize to the tissue or compartment of interest despite complex physiological challenges. Here, we describe further development of an in vivo library selection platform based on self-assembling protein nanoparticles encapsulating their own mRNA genomes (synthetic nucleocapsids or synNCs). We tested two distinct libraries: a low-diversity library composed of synNC surface mutations (45 variants) and a high-diversity library composed of synNCs displaying miniproteins with binder-like properties (6.2 million variants). While we did not identify any variants from the low-diversity surface library that yielded therapeutically relevant changes in biodistribution, the high-diversity miniprotein display library yielded variants that shifted accumulation toward lungs or muscles in just two rounds of in vivo selection. Our approach should contribute to achieving specific tissue homing patterns and identifying targeting ligands for diseases of interest.

Indexed as

Peptide LibraryProteinsMutationNucleocapsidTissue DistributionPeptide LibraryProteinsbiopanningcancerlibrary selectionminiproteinsynthetic nucleocapsid

Identifiers

PMID37939083
PMCPMC10655225

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.