ArticleISME communications2022
Influence of short and long term processes on SAR11 communities in open ocean and coastal systems.
Article in ISME communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
18 citing papers in PubMed.
- Phosphoproteomics reveals essential regulatory roles of phosphorylation in marine oligotrophic bacteria.Marine life science & technology · 2026Article
- Integrated approaches for pathogen monitoring and shotgun metagenomic analysis in Atlantic salmon farming.Scientific reports · 2026Article
- Sub-daily virus sampling at the Bermuda Atlantic Time Series reveals diel and depth-structured population dynamics without community-level shifts.PLoS biology · 2026Article
- Seasonal patterns of DOM molecules are linked to microbial functions in the oligotrophic ocean.mSystems · 2026Article
- Seasonality drives temporal niche partitioning of pelagic prokaryotes.The ISME journal · 2026Article
- Impact of Submarine Groundwater Discharge on Microbial Communities in a Highly Anthropized Coastal Lagoon (Mar Menor, SE Spain).Molecular ecology · 2025Article
- Seasonal Differences in Effects of Microbial Communities on Duckweed Traits.Ecology and evolution · 2025Article
- Seasonal dynamics and factors shaping microbiomes in freshwater finfish earthen aquaculture ponds in Bangladesh.Environmental microbiome · 2025Article
- Large diversity in the O-chain biosynthetic cluster within populations of Pelagibacterales.mBio · 2025Article
- The ecology and plasticity of fish skin and gill microbiomes: seeking what matters in health and disease.FEMS microbiology reviews · 2025Review
- SAR11 ecotypes across ocean basins change with depth due to changes in light and oxygen.The ISME journal · 2025Article
- Global dominance of Haloquadratum walsbyi by a single genomovar with distinct gene content and viral cohorts from close relatives.The ISME journal · 2025Article
- Alterations in bacterial structure and function in seawater due toFrontiers in microbiology · 2025Article
- Particle partitioning and geography drive divergent microbial assembly and network connectivity in coastal South China Sea.Frontiers in microbiology · 2025Article
- Comparative analysis of crab growth performance, enzyme activity, and microbiota between rice-crab coculture and pond farming systems.Frontiers in veterinary science · 2025Article
- Metagenomic time series reveals a Western English Channel viral community dominated by members with strong seasonal signals.The ISME journal · 2024Article
- Gradients of bacteria in the oceanic water column reveal finely-resolved vertical distributions.PloS one · 2024Article
- Novel pelagiphage isolate Polarivirus skadi is a polar specialist that dominates SAR11-associated bacteriophage communities at high latitudes.The ISME journal · 2023Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
Abstract
SAR11 bacteria dominate the surface ocean and are major players in converting fixed carbon back to atmospheric carbon dioxide. The SAR11 clade is comprised of niche-specialized ecotypes that display distinctive spatiotemporal transitions. We analyzed SAR11 ecotype seasonality in two long-term 16S rRNA amplicon time series representing different North Atlantic regimes: the Sargasso Sea (subtropical ocean-gyre; BATS) and the temperate coastal Western English Channel (WEC). Using phylogenetically resolved amplicon sequence variants (ASVs), we evaluated seasonal environmental constraints on SAR11 ecotype periodicity. Despite large differences in temperature and nutrient availability between the two sites, at both SAR11 succession was defined by summer and winter clusters of ASVs. The summer cluster was dominated by ecotype Ia.3 in both sites. Winter clusters were dominated by ecotypes Ib and IIa.A at BATS and Ia.1 and IIa.B at WEC. A 2-year weekly analysis within the WEC time series showed that the response of SAR11 communities to short-term environmental fluctuations was variable. In 2016, community shifts were abrupt and synchronized to environmental shifts. However, in 2015, changes were gradual and decoupled from environmental fluctuations, likely due to increased mixing from strong winds. We demonstrate that interannual weather variability disturb the pace of SAR11 seasonal progression.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.