Evidence map›Paper›PMID 37938671›Full record

ArticleISME communications2022

Farm-scale differentiation of active microbial colonizers.

William L King, Laura M Kaminsky, Sarah C Richards, Brosi A Bradley, Jason P Kaye, Terrence H Bell

Abstract read
In one paragraph

Article in ISME communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

William L KingDepartment of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, PA, 16802, USA.ORCID http://orcid.org/0000-0001-7272-8242
Laura M KaminskyDepartment of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, PA, 16802, USA.ORCID http://orcid.org/0000-0002-4628-4665
Sarah C RichardsDepartment of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, PA, 16802, USA.
Brosi A BradleyDepartment of Ecosystem Science and Management, The Pennsylvania State University, University Park, PA, 16802, USA.
Jason P KayeIntercollege Graduate Degree Program in Ecology, The Pennsylvania State University, University Park, PA, 16802, USA.
Terrence H BellDepartment of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, PA, 16802, USA. thb15@psu.edu.ORCID http://orcid.org/0000-0003-3603-7270

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial movement is important for replenishing lost soil microbial biodiversity and driving plant root colonization, particularly in managed agricultural soils, where microbial diversity and composition can be disrupted. Despite abundant survey-type microbiome data in soils, which are obscured by legacy DNA and microbial dormancy, we do not know how active microbial pools are shaped by local soil properties, agricultural management, and at differing spatial scales. To determine how active microbial colonizers are shaped by spatial scale and environmental conditions, we deployed microbial traps (i.e. sterile soil enclosed by small pore membranes) containing two distinct soil types (forest; agricultural), in three neighboring locations, assessing colonization through 16S rRNA gene and fungal ITS amplicon sequencing. Location had a greater impact on fungal colonizers (R

Identifiers

PMID37938671
PMCPMC9723676

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.