Evidence map›Paper›PMID 37938659›Full record

ArticleISME communications2022

Bioavailable iron titrations reveal oceanic Synechococcus ecotypes optimized for different iron availabilities.

Naomi E Gilbert, Gary R LeCleir, Robert F Strzepek, Michael J Ellwood, Benjamin S Twining, S Roux, C Pennacchio, Philip W Boyd, Steven W Wilhelm

Open access · goldAbstract read
In one paragraph

Article in ISME communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Microbial metal physiology: ions to ecosystems.Nature reviews. Microbiology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Naomi E GilbertDepartment of Microbiology, The University of Tennessee, Knoxville, TN, 37996, USA.ORCID http://orcid.org/0000-0002-5691-5547
Gary R LeCleirDepartment of Microbiology, The University of Tennessee, Knoxville, TN, 37996, USA.
Robert F StrzepekInstitute for Marine and Antarctic Studies, University of Tasmania, Hobart, TAS, 7004, Australia.ORCID http://orcid.org/0000-0002-6442-7121
Michael J EllwoodResearch School of Earth Sciences, Australian National University, Canberra, ACT, Australia.
Benjamin S TwiningBigelow Laboratory for Ocean Sciences, East Boothbay, ME, USA.ORCID http://orcid.org/0000-0002-1365-9192
S RouxDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
C PennacchioDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-0297-3960
Philip W BoydInstitute for Marine and Antarctic Studies, University of Tasmania, Hobart, TAS, 7004, Australia.
Steven W WilhelmDepartment of Microbiology, The University of Tennessee, Knoxville, TN, 37996, USA. wilhelm@utk.edu.ORCID http://orcid.org/0000-0001-6283-8077
University of Tennessee at Knoxville · USLawrence Berkeley National Laboratory · USUniversity of Tasmania · AUAustralian National University · AUBigelow Laboratory for Ocean Sciences · US

Funding

National Science Foundation (NSF) OCE- 1829641U.S. Department of Energy (DOE) DE-AC02-05CH11231U.S. Department of Energy (DOE) DE-AC02-05CH11231.
6 · The paper itself

Abstract

The trace metal iron (Fe) controls the diversity and activity of phytoplankton across the surface oceans, a paradigm established through decades of in situ and mesocosm experimental studies. Despite widespread Fe-limitation within high-nutrient, low chlorophyll (HNLC) waters, significant contributions of the cyanobacterium Synechococcus to the phytoplankton stock can be found. Correlations among differing strains of Synechococcus across different Fe-regimes have suggested the existence of Fe-adapted ecotypes. However, experimental evidence of high- versus low-Fe adapted strains of Synechococcus is lacking, and so we investigated the transcriptional responses of microbial communities inhabiting the HNLC, sub-Antarctic region of the Southern Ocean during the Spring of 2018. Analysis of metatranscriptomes generated from on-deck incubation experiments reflecting a gradient of Fe-availabilities reveal transcriptomic signatures indicative of co-occurring Synechococcus ecotypes adapted to differing Fe-regimes. Functional analyses comparing low-Fe and high-Fe conditions point to various Fe-acquisition mechanisms that may allow persistence of low-Fe adapted Synechococcus under Fe-limitation. Comparison of in situ surface conditions to the Fe-titrations indicate ecological relevance of these mechanisms as well as persistence of both putative ecotypes within this region. This Fe-titration approach, combined with transcriptomics, highlights the short-term responses of the in situ phytoplankton community to Fe-availability that are often overlooked by examining genomic content or bulk physiological responses alone. These findings expand our knowledge about how phytoplankton in HNLC Southern Ocean waters adapt and respond to changing Fe supply.

Identifiers

PMID37938659
PMCPMC9723758
OpenAlexW4283747077

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.