Evidence map›Paper›PMID 37938580›Full record

ArticleNature communications2023

Inflammation in the tumor-adjacent lung as a predictor of clinical outcome in lung adenocarcinoma.

Igor Dolgalev, Hua Zhou, Nina Murrell, Hortense Le, Theodore Sakellaropoulos, Nicolas Coudray, Kelsey Zhu, Varshini Vasudevaraja, Anna Yeaton, Chandra Goparaju and 30 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 23 citations in OpenAlex.

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  15. Article
  16. Article
  17. Article
  18. Lung Microbial and Host Genomic Signatures as Predictors of Prognosis in Early-Stage Adenocarcinoma.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2024
    Article
  19. Article
  20. Assessing the prognostic value ofFrontiers in oncology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 6 institutions in 2 countries.

Igor Dolgalev *Department of Pathology, NYU Grossman School of Medicine, New York, USA.ORCID 0000-0003-4451-126X
Hua Zhou *Department of Pathology, NYU Grossman School of Medicine, New York, USA.
Nina Murrell *Department of Pathology, NYU Grossman School of Medicine, New York, USA.
Hortense LeDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.ORCID 0000-0001-6681-7652
Theodore SakellaropoulosDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Nicolas CoudrayApplied Bioinformatics Laboratories, NYU Grossman School of Medicine, New York, USA.
Kelsey ZhuDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Varshini VasudevarajaDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Anna YeatonThe Optical Profiling Platform at The Broad Institute of MIT And Harvard, Cambridge, USA.
Chandra GoparajuDepartment of Cardiothoracic Surgery, NYU Grossman School of Medicine, New York, USA.
Yonghua LiDivision of Pulmonary, Critical Care and Sleep Medicine, NYU Grossman School of Medicine, New York, USA.
Imran SulaimanDivision of Pulmonary, Critical Care and Sleep Medicine, NYU Grossman School of Medicine, New York, USA.
Jun-Chieh J TsayDivision of Pulmonary, Critical Care and Sleep Medicine, NYU Grossman School of Medicine, New York, USA.
Peter MeynGenome Technology Center, Office of Science and Research, NYU Grossman School of Medicine, New York, USA.
Hussein MohamedDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Iris SydneyCenter for Biospecimen Research and Development, NYU Grossman School of Medicine, New York, USA.
Tomoe ShiomiCenter for Biospecimen Research and Development, NYU Grossman School of Medicine, New York, USA.ORCID 0009-0005-7611-8528
Sitharam RamaswamiDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Navneet NarulaDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Ruth KulickeCelsius Therapeutics, Cambridge, Massachusetts, USA.
Fred P DavisCelsius Therapeutics, Cambridge, Massachusetts, USA.
Nicolas StranskyCelsius Therapeutics, Cambridge, Massachusetts, USA.
Gromoslaw A SmolenCelsius Therapeutics, Cambridge, Massachusetts, USA.ORCID 0000-0003-0136-4685
Wei-Yi ChengPharma Research & Early Development Informatics, Roche Innovation Center New York, New Jersey, USA.
James CaiPharma Research & Early Development Informatics, Roche Innovation Center New York, New Jersey, USA.
Salman PunekarLaura and Isaac Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Vamsidhar VelchetiLaura and Isaac Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Daniel H StermanDivision of Pulmonary, Critical Care and Sleep Medicine, NYU Grossman School of Medicine, New York, USA.
J T PoirierLaura and Isaac Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.ORCID 0000-0001-9795-5644
Ben NeelLaura and Isaac Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Kwok-Kin WongLaura and Isaac Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.ORCID 0000-0001-6323-235X
Luis ChiribogaDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.ORCID 0000-0002-2028-6873
Adriana HeguyDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.ORCID 0000-0002-2836-6683
Thales PapagiannakopoulosDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.ORCID 0000-0002-2251-1624
Bettina NadorpDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.ORCID 0000-0003-1974-8425
Matija SnuderlDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Leopoldo N SegalDivision of Pulmonary, Critical Care and Sleep Medicine, NYU Grossman School of Medicine, New York, USA.
Andre L MoreiraDepartment of Pathology, NYU Grossman School of Medicine, New York, USA.
Harvey I PassDepartment of Cardiothoracic Surgery, NYU Grossman School of Medicine, New York, USA. Harvey.Pass@nyulangone.org.
Aristotelis TsirigosDepartment of Pathology, NYU Grossman School of Medicine, New York, USA. Aristotelis.Tsirigos@nyulangone.org.ORCID 0000-0002-7512-8477
New York University · USNYU Langone Health · USCelsius Therapeutics (United States) · USOffice of Science · USBroad Institute · USTelio (Norway) · NO

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Microbial and host biomarker development for detection and prognosis of early stage non-small cell lung cancerU2CCA271890 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Leopoldo Nicolas Segal · 2023 to 2026
$4.7M
Local microbiota signatures of pro-tumor immunity and checkpoint inhibition susceptibility in lung cancerR37CA244775 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Leopoldo Nicolas Segal · 2020 to 2026
$4.7M
The EDRN Mesothelioma Biomarker Discovery LaboratoryU01CA214195 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PASS, HARVEY IRA, YANG, HAINING · 2016 to 2021
$3.5M
NCI NIH HHS P30 CA016087NCI NIH HHS R37 CA244775NCI NIH HHS U01 CA214195NCI NIH HHS U2C CA271890
6 · The paper itself

Abstract

Approximately 30% of early-stage lung adenocarcinoma patients present with disease progression after successful surgical resection. Despite efforts of mapping the genetic landscape, there has been limited success in discovering predictive biomarkers of disease outcomes. Here we performed a systematic multi-omic assessment of 143 tumors and matched tumor-adjacent, histologically-normal lung tissue with long-term patient follow-up. Through histologic, mutational, and transcriptomic profiling of tumor and adjacent-normal tissue, we identified an inflammatory gene signature in tumor-adjacent tissue as the strongest clinical predictor of disease progression. Single-cell transcriptomic analysis demonstrated the progression-associated inflammatory signature was expressed in both immune and non-immune cells, and cell type-specific profiling in monocytes further improved outcome predictions. Additional analyses of tumor-adjacent transcriptomic data from The Cancer Genome Atlas validated the association of the inflammatory signature with worse outcomes across cancers. Collectively, our study suggests that molecular profiling of tumor-adjacent tissue can identify patients at high risk for disease progression.

Indexed as

Adenocarcinoma of LungLung NeoplasmsDisease ProgressionHumansInflammationLung

Identifiers

PMID37938580
PMCPMC10632519
OpenAlexW4388493044

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.