Evidence map›Paper›PMID 37937856›Full record

ArticleProtein science : a publication of the Protein Society2023

Widespread amyloid aggregates formation by Zika virus proteins and peptides.

Rajanish Giri, Taniya Bhardwaj, Shivani K Kapuganti, Kumar Udit Saumya, Nitin Sharma, Aparna Bhardwaj, Richa Joshi, Deepanshu Verma, Kundlik Gadhave

Open access · greenAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Widespread amyloid aggregates formation by Zika virus proteins and peptides.Protein science : a publication of the Protein Society · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Rajanish GiriSchool of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh, India.ORCID 0000-0002-2046-836X
Taniya BhardwajSchool of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh, India.
Shivani K KapugantiSchool of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh, India.
Kumar Udit SaumyaSchool of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh, India.
Nitin SharmaDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Aparna BhardwajSchool of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh, India.
Richa JoshiSchool of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh, India.
Deepanshu VermaSchool of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh, India.
Kundlik GadhaveDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Indian Institute of Technology Mandi · INJohns Hopkins University · USWashington University in St. Louis · US

Funding

Department of Biotechnology BT/11/IYBA/2018/06Indian Council of Medical Research 52/04/2020/BIO/BMSIndian Council of Medical Research 58/6/2020/PHA/BMSMHRD-SPARC SPARC/2018-2019/P37/SLScience and Engineering Research Board CRG/2019/005603
6 · The paper itself

Abstract

Viral pathogenesis typically involves numerous molecular mechanisms. Protein aggregation is a relatively unknown characteristic of viruses, despite the fact that viral proteins have been shown to form terminally misfolded forms. Zika virus (ZIKV) is a neurotropic one with the potential to cause neurodegeneration. Its protein amyloid aggregation may link the neurodegenerative component to the pathogenicity associated with the viral infection. Therefore, we investigated protein aggregation in the ZIKV proteome as a putative pathogenic route and one of the alternate pathways. We discovered that it contains numerous anticipated aggregation-prone regions in this investigation. To validate our prediction, we used a combination of supporting experimental techniques routinely used for morphological characterization and study of amyloid aggregates. Several ZIKV proteins and peptides, including the full-length envelope protein, its domain III (EDIII) and fusion peptide, Pr N-terminal peptide, NS1 β-roll peptide, membrane-embedded signal peptide 2K, and cytosolic region of NS4B protein, were shown to be highly aggregating in our study. Because our findings show that viral proteins can form amyloids in vitro, we need to do a thorough functional study of these anticipated APRs to understand better the role of amyloids in the pathophysiology of ZIKV infection.

Indexed as

Zika VirusZika Virus InfectionAmyloidogenic ProteinsAntibodies, ViralHumansPeptidesProtein AggregatesViral Envelope ProteinsAmyloidogenic ProteinsAntibodies, ViralPeptidesProtein AggregatesViral Envelope Proteinsaggregation-prone regionsanti-amyloid antibodybacterial cell stainingenvelope proteinThTviral protein aggregationZika pathogenesis

Identifiers

PMID37937856
PMCPMC10682691
OpenAlexW4388491481

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.