Evidence map›Paper›PMID 37937851›Full record

ArticleClinical and translational gastroenterology2024

Proton Pump Inhibitor Use and Complications of Cirrhosis Are Linked With Distinct Gut Microbial Bacteriophage and Eukaryotic Viral-Like Particle Signatures in Cirrhosis.

Marcela Peña Rodríguez, Andrew Fagan, Masoumeh Sikaroodi, Patrick M Gillevet, Jasmohan S Bajaj

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational gastroenterology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. JHEP reports : innovation in hepatology · 2026
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Marcela Peña RodríguezUniversity of Guadalajara, Guadalajara, Mexico.
Andrew FaganVirginia Commonwealth University and Richmond VA Medical Center, Richmond, Virginia, USA.
Masoumeh SikaroodiGeorge Mason University, Manassas, Virginia, USA .
Patrick M GillevetGeorge Mason University, Manassas, Virginia, USA .
Jasmohan S BajajVirginia Commonwealth University and Richmond VA Medical Center, Richmond, Virginia, USA.ORCID 0000-0003-4928-3681
George Mason University · USHunter Holmes McGuire VA Medical Center · USUniversidad de Guadalajara · MX

Funding

Fecal microbiota transplant for Alcohol-Associated CirrhosisR01AA029398 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI Jasmohan S Bajaj, ALEXANDER KHORUTS · 2022 to 2026
$2.9M
Gut Microbiota in the Modulation of Outcomes after Liver TransplantR21TR003095 · NCATS · VIRGINIA COMMONWEALTH UNIVERSITY · PI BAJAJ, JASMOHAN S, VERNA, ELIZABETH CLARICE · 2020 to 2021
$448k
Fecal Microbiota Transplant in Veterans with CirrhosisI01CX001076 · VA · VA VETERANS ADMINISTRATION HOSPITAL · PI BAJAJ, JASMOHAN S · 2015 to 2024
–
BCCMA: Targeting Gut Microbiome in Gastrointestinal and Liver Diseases in US Veterans; CMA4: At the Crossroads of the Gut Microbiome, Cirrhosis, and PTSDI01CX002472 · VA · VA VETERANS ADMINISTRATION HOSPITAL · PI Jasmohan S Bajaj · 2023 to 2026
–
CSRD VA I01 CX001076CSRD VA I01 CX002472NCATS NIH HHS R21 TR003095NCATS NIH HHS R21TR003095NIAAA NIH HHS R01 AA029398NIAAA NIH HHS RO1AA029398
6 · The paper itself

Abstract

introductionProton pump inhibitors (PPIs) modulate the progression of cirrhosis to hepatic encephalopathy (HE) and can affect the bacterial microbiome. However, the impact of PPI on the virome in cirrhosis using viral-like particle (VLP) analysis is unclear.

methodsWe determined the VLP in the stool microbiome in patients with cirrhosis cross-sectionally (ascites, HE, and PPI use analyzed) who were followed up for 6-month hospitalizations and through 2 clinical trials of PPI withdrawal and initiation.

resultsIn a cross-sectional study, PPI users had greater ascites prevalence and 6-month hospitalizations, but VLP α diversity was similar. Among phages, PPI users had lower Autographviridae and higher Streptococcus phages and Herelleviridae than nonusers, whereas opposite trends were seen in ascites and HE. Trends of eukaryotic viruses (higher Adenoviridae and lower Virgaviridae/Smacoviridae) were similar for PPI, HE, and ascites. Twenty-one percent were hospitalized, mostly due to HE. α Diversity was similar in the hospitalized/nonhospitalized/not groups. Higher Gokushovirinae and lower crAssphages were related to hospitalizations such as HE-related cross-sectional VLP changes. As part of the clinical trial, PPIs were added and withdrawn in 2 different decompensated groups over 14 days. No changes in α diversity were observed. Withdrawal reduced crAssphages, and initiation reduced Gokushovirinae and Bacteroides phages. DISCUSSION: In cirrhosis, PPI use has a gut microbial VLP phage signature that is different from that in HE and ascites, and VLP changes are linked with hospitalizations over 6 months, independent of clinical biomarkers. Eukaryotic viral patterns were consistent across PPI use, HE, and ascites, indicating a relationship with the progression of cirrhosis. PPIs alone showed modest VLP changes with withdrawal or initiation. Distinct phage and eukaryotic viral patterns are associated with the use of PPIs in cirrhosis.

Indexed as

BacteriophagesGastrointestinal MicrobiomeHepatic EncephalopathyAscitesClinical Trials as TopicCross-Sectional StudiesHumansLiver CirrhosisProton Pump InhibitorsProton Pump Inhibitors

Identifiers

PMID37937851
PMCPMC10887442
OpenAlexW4388499981

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.