Evidence map›Paper›PMID 37936225›Full record

ArticleGenome biology2023

Phytochromes transmit photoperiod information via the evening complex in Brachypodium.

Mingjun Gao, Yunlong Lu, Feng Geng, Cornelia Klose, Anne-Marie Staudt, He Huang, Duy Nguyen, Hui Lan, Han Lu, Todd C Mockler and 5 more

Abstract read
In one paragraph

Article in Genome biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. The FKF1-ELF3-PRC2 module regulates flowering time in response to light in temperate grasses.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Review
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  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Mingjun Gao *Sainsbury Laboratory, University of Cambridge, 47 Bateman St., Cambridge, CB2 1LR, UK.
Yunlong Lu *Leibniz-Institut für Gemüse- und Zierpflanzenbau, Theodor-Echtermeyer-Weg 1, Großbeeren, 14979, Germany.
Feng GengSainsbury Laboratory, University of Cambridge, 47 Bateman St., Cambridge, CB2 1LR, UK.
Cornelia KloseInstitut für Biologie II, University of Freiburg, Schaenzlestr. 1, Freiburg, 79104, Germany.
Anne-Marie StaudtInstitut für Biologie II, University of Freiburg, Schaenzlestr. 1, Freiburg, 79104, Germany.
He HuangDonald Danforth Plant Science Center, St. Louis, MO, 63132, USA.
Duy NguyenSainsbury Laboratory, University of Cambridge, 47 Bateman St., Cambridge, CB2 1LR, UK.
Hui LanSainsbury Laboratory, University of Cambridge, 47 Bateman St., Cambridge, CB2 1LR, UK.
Han LuMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, National Observations and Research Station for Wetland Ecosystems of the Yangtze Estuary, Institute of Biodiversity Science and Institute of Eco-Chongming, School of Life Sciences, Fudan University, Shanghai, China.
Todd C MocklerDonald Danforth Plant Science Center, St. Louis, MO, 63132, USA.
Dmitri A NusinowDonald Danforth Plant Science Center, St. Louis, MO, 63132, USA.
Andreas HiltbrunnerInstitut für Biologie II, University of Freiburg, Schaenzlestr. 1, Freiburg, 79104, Germany.
Eberhard SchäferInstitut für Biologie II, University of Freiburg, Schaenzlestr. 1, Freiburg, 79104, Germany.
Philip A WiggeSainsbury Laboratory, University of Cambridge, 47 Bateman St., Cambridge, CB2 1LR, UK. wigge@igzev.de.ORCID 0000-0003-4822-361X
Katja E JaegerSainsbury Laboratory, University of Cambridge, 47 Bateman St., Cambridge, CB2 1LR, UK. jaeger@igzev.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDaylength is a key seasonal cue for animals and plants. In cereals, photoperiodic responses are a major adaptive trait, and alleles of clock genes such as PHOTOPERIOD1 (PPD1) and EARLY FLOWERING3 (ELF3) have been selected for in adapting barley and wheat to northern latitudes. How monocot plants sense photoperiod and integrate this information into growth and development is not well understood.

resultsWe find that phytochrome C (PHYC) is essential for flowering in Brachypodium distachyon. Conversely, ELF3 acts as a floral repressor and elf3 mutants display a constitutive long day phenotype and transcriptome. We find that ELF3 and PHYC occur in a common complex. ELF3 associates with the promoters of a number of conserved regulators of flowering, including PPD1 and VRN1. Consistent with observations in barley, we are able to show that PPD1 overexpression accelerates flowering in short days and is necessary for rapid flowering in response to long days. PHYC is in the active Pfr state at the end of the day, but we observe it undergoes dark reversion over the course of the night.

conclusionsWe propose that PHYC acts as a molecular timer and communicates information on night-length to the circadian clock via ELF3.

Indexed as

BrachypodiumPhytochromeCircadian RhythmFlowersGene Expression Regulation, PlantPhotoperiodPlant ProteinsPhytochromePlant Proteins

Identifiers

PMID37936225
PMCPMC10631206

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.