Evidence map›Paper›PMID 37935474›Full record

ArticleFEMS yeast research2023

The prevalence of killer yeasts and double-stranded RNAs in the budding yeast Saccharomyces cerevisiae.

Angela M Crabtree, Nathan T Taggart, Mark D Lee, Josie M Boyer, Paul A Rowley

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in FEMS yeast research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. ThemBio · 2025
    Article
  9. Article
  10. A Comprehensive Structural and Functional Analysis ofbioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Review
  13. Inhibition of diastatic yeasts byApplied and environmental microbiology · 2024
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Angela M CrabtreeDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, United States.ORCID 0000-0001-6584-8158
Nathan T TaggartDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, United States.ORCID 0000-0002-6529-9264
Mark D LeeDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, United States.ORCID 0000-0002-9083-2323
Josie M BoyerDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, United States.ORCID 0000-0002-5203-2122
Paul A RowleyDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, United States.ORCID 0000-0002-3590-5139
University of Idaho · US

Funding

Women's health: interplay of maternal diet and key demographics on neurological health in the rural frontier and remote WestP20GM103408 · NIGMS · UNIVERSITY OF IDAHO · PI Scott A Minnich · 2012 to 2026
$59.8M
Sequence-structure-function relationships in human visual photopigmentsP20GM104420 · NIGMS · UNIVERSITY OF IDAHO · PI MILLER, CRAIG R · 2015 to 2024
$22.9M
VPS35 D620N inhibits autophagy through disrupted hyaluronic acid-CD44 signalingP20GM109095 · NIGMS · BOISE STATE UNIVERSITY · PI OCHOA-REPARAZ, JAVIER · 2014 to 2023
$22.7M
NIGMS NIH HHS P20 GM103408NIGMS NIH HHS P20 GM104420NIGMS NIH HHS P20 GM109095NIH HHS #P20GM104420
6 · The paper itself

Abstract

Killer toxins are antifungal proteins produced by many species of "killer" yeasts, including the brewer's and baker's yeast Saccharomyces cerevisiae. Screening 1270 strains of S. cerevisiae for killer toxin production found that 50% are killer yeasts, with a higher prevalence of yeasts isolated from human clinical samples and winemaking processes. Since many killer toxins are encoded by satellite double-stranded RNAs (dsRNAs) associated with mycoviruses, S. cerevisiae strains were also assayed for the presence of dsRNAs. This screen identified that 51% of strains contained dsRNAs from the mycovirus families Totiviridae and Partitiviridae, as well as satellite dsRNAs. Killer toxin production was correlated with the presence of satellite dsRNAs but not mycoviruses. However, in most killer yeasts, whole genome analysis identified the killer toxin gene KHS1 as significantly associated with killer toxin production. Most killer yeasts had unique spectrums of antifungal activities compared to canonical killer toxins, and sequence analysis identified mutations that altered their antifungal activities. The prevalence of mycoviruses and killer toxins in S. cerevisiae is important because of their known impact on yeast fitness, with implications for academic research and industrial application of this yeast species.

Indexed as

RNA, Double-StrandedSaccharomyces cerevisiaeAntifungal AgentsHumansKiller Factors, YeastPrevalenceYeastsAntifungal AgentsKiller Factors, YeastRNA, Double-StrandeddsRNA satellitekiller phenotypekiller toxinkiller yeastmycovirus

Identifiers

PMID37935474
PMCPMC10664976
OpenAlexW4388486874

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.