Evidence map›Paper›PMID 37935005›Full record

ArticleJournal of natural products2023

A Data Deposition Platform for Sharing Nuclear Magnetic Resonance Data.

Matthew Pin, Ella F Poynton, Tamara Jordan, Jonghyeok Kim, Benjamin Ledingham, Jeffrey A van Santen, Vera Yang, Andrew Maras, Pegah Tavangar, Vasuk Gautam and 10 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of natural products, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Matthew PinDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.ORCID 0009-0001-9069-0943
Ella F PoyntonDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Tamara JordanDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Jonghyeok KimDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Benjamin LedinghamDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Jeffrey A van SantenDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.ORCID 0000-0002-5424-804X
Vera YangDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Andrew MarasDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Pegah TavangarDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Vasuk GautamDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Harrison PetersDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Tanvir SajedDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Brian L LeeDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Hailey A ShrefflerEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, United States.
James T KollerInterdisciplinary Plant Group, MU Metabolomics Center, Bond Life Sciences Center, Department of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States.
Zachary M TretterInterdisciplinary Plant Group, MU Metabolomics Center, Bond Life Sciences Center, Department of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States.
John R CortEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, United States.ORCID 0000-0001-6342-6461
Lloyd W SumnerInterdisciplinary Plant Group, MU Metabolomics Center, Bond Life Sciences Center, Department of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States.ORCID 0000-0002-4086-663X
David S WishartDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.ORCID 0000-0002-3207-2434
Roger G LiningtonDepartment of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.ORCID 0000-0003-1818-4971

Funding

NP-MRD: Natural Products Magnetic Resonance DatabaseU24AT010811 · NCCIH · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI CORT, JOHN R · 2020 to 2024
$4.1M
NCCIH NIH HHS U24 AT010811
6 · The paper itself

Abstract

Nuclear magnetic resonance (NMR) data are rarely deposited in open databases, leading to loss of critical scientific knowledge. Existing data reporting methods (images, tables, lists of values) contain less information than raw data and are poorly standardized. Together, these issues limit FAIR (findable, accessible, interoperable, reusable) access to these data, which in turn creates barriers for compound dereplication and the development of new data-driven discovery tools. Existing NMR databases either are not designed for natural products data or employ complex deposition interfaces that disincentivize deposition. Journals, including the

Indexed as

Biological ProductsDatabases, FactualMagnetic Resonance SpectroscopyBiological Products

Identifiers

PMID37935005
PMCPMC11119957

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.