Evidence map›Paper›PMID 37932269›Full record

ArticleNature communications2023

Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.

Augustinas Silale, Yiling Zhu, Jerzy Witwinowski, Robert E Smith, Kahlan E Newman, Satya P Bhamidimarri, Arnaud Baslé, Syma Khalid, Christophe Beloin, Simonetta Gribaldo and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. The mycomembrane proteins PorH and ProtX are inserted at polar growth zones and linked to the cell wall.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. OmpK36 GD insertion induces RpoS-dependentAntimicrobial agents and chemotherapy · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. OmpA controls order in the outer membrane and shares the mechanical load.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Augustinas SilaleBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Framlington Place, NE2 4HH, Newcastle upon Tyne, UK.ORCID 0000-0003-3338-2087
Yiling ZhuBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Framlington Place, NE2 4HH, Newcastle upon Tyne, UK.
Jerzy WitwinowskiInstitut Pasteur, Université de Paris Cité, Unit Evolutionary Biology of the Microbial Cell, Paris, France.ORCID 0000-0002-7167-741X
Robert E SmithInstitut Pasteur, Université de Paris Cité, Unit Evolutionary Biology of the Microbial Cell, Paris, France.
Kahlan E NewmanSchool of Chemistry, University of Southampton, Southampton, SO17 1BJ, UK.ORCID 0000-0002-2974-528X
Satya P BhamidimarriBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Framlington Place, NE2 4HH, Newcastle upon Tyne, UK.
Arnaud BasléBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Framlington Place, NE2 4HH, Newcastle upon Tyne, UK.
Syma KhalidDepartment of Biochemistry, University of Oxford, Oxford, OX1 3QU, UK.ORCID 0000-0002-3694-5044
Christophe BeloinInstitut Pasteur, Université de Paris Cité, Genetics of Biofilms Laboratory, Paris, France. christophe.beloin@pasteur.fr.ORCID 0000-0002-0344-3443
Simonetta GribaldoInstitut Pasteur, Université de Paris Cité, Unit Evolutionary Biology of the Microbial Cell, Paris, France. simonetta.gribaldo@pasteur.fr.ORCID 0000-0002-7662-021X
Bert van den BergBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Framlington Place, NE2 4HH, Newcastle upon Tyne, UK. bert.van-den-berg@newcastle.ac.uk.ORCID 0000-0003-1966-8804

Funding

Wellcome Trust
6 · The paper itself

Abstract

The outer membrane (OM) in diderm, or Gram-negative, bacteria must be tethered to peptidoglycan for mechanical stability and to maintain cell morphology. Most diderm phyla from the Terrabacteria group have recently been shown to lack well-characterised OM attachment systems, but instead have OmpM, which could represent an ancestral tethering system in bacteria. Here, we have determined the structure of the most abundant OmpM protein from Veillonella parvula (diderm Firmicutes) by single particle cryogenic electron microscopy. We also characterised the channel properties of the transmembrane β-barrel of OmpM and investigated the structure and PG-binding properties of its periplasmic stalk region. Our results show that OM tethering and nutrient acquisition are genetically linked in V. parvula, and probably other diderm Terrabacteria. This dual function of OmpM may have played a role in the loss of the OM in ancestral bacteria and the emergence of monoderm bacterial lineages.

Indexed as

BacillotaCell WallBacteriaBacterial Outer Membrane ProteinsCell MembraneGram-Negative BacteriaNutrientsBacterial Outer Membrane ProteinsNutrients

Identifiers

PMID37932269
PMCPMC10628300

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.