Evidence map›Paper›PMID 37931523›Full record

ArticleComputers in biology and medicine2023

Exploring a frequency-domain attention-guided cascade U-Net: Towards spatially tunable segmentation of vasculature.

Nan Mu, Zonghan Lyu, Xiaoming Zhang, Robert McBane, Aditya S Pandey, Jingfeng Jiang

Abstract read
In one paragraph

Article in Computers in biology and medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nan MuDepartment of Biomedical Engineering, Michigan Technological University, Houghton, MI, 49931, USA; School of Computer Science, Sichuan Normal University, Chengdu, 610101, China.
Zonghan LyuDepartment of Biomedical Engineering, Michigan Technological University, Houghton, MI, 49931, USA.
Xiaoming ZhangMayo Clinic, Rochester, MN, 55902, USA.
Robert McBaneMayo Clinic, Rochester, MN, 55902, USA.
Aditya S PandeyDepartment of Neurosurgery, University of Michigan, Ann Arbor, MI, 48105, USA.
Jingfeng JiangDepartment of Biomedical Engineering, Michigan Technological University, Houghton, MI, 49931, USA; Center for Biocomputing and Digital Health, Health Research Institute and Institute of Computing and Cybernetics, Michigan Technological University, Houghton, MI, 49931, USA. Electronic address: jjiang1@mtu.edu.

Funding

Personalized Management of Intracranial Aneurysms Using Computer-aided AnalyticsR01EB029570 · NIBIB · MICHIGAN TECHNOLOGICAL UNIVERSITY · PI JIANG, JINGFENG · 2021 to 2024
$1.3M
American Heart Association-American Stroke Association 23POST1022454NIBIB NIH HHS R01 EB029570
6 · The paper itself

Abstract

Developing fully automatic and highly accurate medical image segmentation methods is critically important for vascular disease diagnosis and treatment planning. Although advances in convolutional neural networks (CNNs) have spawned an array of automatic segmentation models converging to saturated high performance, none have explored whether CNNs can achieve (spatially) tunable segmentation. As a result, we propose multiple attention modules from a frequency-domain perspective to construct a unified CNN architecture for segmenting vasculature with desired (spatial) scales. The proposed CNN architecture is named frequency-domain attention-guided cascaded U-Net (FACU-Net). Specifically, FACU-Net contains two innovative components: (1) a frequency-domain-based channel attention module that adaptively tunes channel-wise feature responses and (2) a frequency-domain-based spatial attention module that enables the deep network to concentrate on foreground regions of interest (ROIs) effectively. Furthermore, we devised a novel frequency-domain-based content attention module to enhance or weaken the high (spatial) frequency information, allowing us to strengthen or eliminate vessels of interest. Extensive experiments using clinical data from patients with intracranial aneurysms (IA) and abdominal aortic aneurysms (AAA) demonstrated that the proposed FACU-Net met its design goal. In addition, we further investigated the association between varying (spatial) frequency components and the desirable vessel size/scale attributes. In summary, our preliminary findings are encouraging, and further developments may lead to deployable image segmentation models that are spatially tunable for clinical applications.

Indexed as

Aortic Aneurysm, AbdominalIntracranial AneurysmHumansImage Processing, Computer-AssistedNeural Networks, ComputerAbdominal aortic aneurysmConvolutional neural networkFrequency-domain attentionIntracranial aneurysmTunable segmentation

Identifiers

PMID37931523
PMCPMC10841687

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.