Evidence map›Paper›PMID 37924134›Full record

ArticleVirology journal2023

Molecular epidemiology and phylodynamic analysis of enterovirus 71 in Beijing, China, 2009-2019.

Jie Li, Zhichao Liang, Da Huo, Yang Yang, Renqing Li, Lei Jia, Xiaoli Wang, Chun Huang, Quanyi Wang

Erratum issuedAbstract read
In one paragraph

Article in Virology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Jie LiInstitute for HIV/AIDS and STD Prevention and Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China.
Zhichao LiangInstitute for Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China.
Da HuoInstitute for Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China.
Yang YangInstitute for Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China.
Renqing LiInstitute for Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China.
Lei JiaInstitute for Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China.
Xiaoli WangBeijing office of center for global Health, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China.
Chun HuangInstitute for HIV/AIDS and STD Prevention and Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China. huangch@bjcdc.org.
Quanyi WangInstitute for Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevention and Control, No.16, Hepingli middle Road, Dongcheng District, Beijing, 100013, People's Republic of China. bjcdcxm@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEnterovirus 71(EV71)-associated hand, foot and mouth disease (HFMD) decreased dramatically in Beijing from 2009 to 2019. This study was to investigate the epidemiological characteristics, evolutionary dynamics, geographic diffusion pathway, and other features of EV71 in Beijing, China.

methodsWe conducted a retrospective study of EV71-associated HFMD and its causative agent in Beijing, China, from 2009 to 2019. Phylogenetic and phylogeographic methods based on the EV71 genome were used to determine the evolution features, origin, and spatiotemporal dynamics. Positive selection sites in the VP1 gene were identified and exhibited in the tertiary structure. Bayesian birth-death skyline model was used to estimate the effective reproductive number (Re).

resultsEV71-associated HFMD decreased greatly in Beijing. From 2009 to 2019, EV71 strains prevalent in Beijing shared high homology in each gene segment and evolved with a rate of 4.99*10

conclusionIn recent years, EV71 was not the primary causative agent of HFMD in Beijing. The low Re estimate of EV71 in Beijing implied that strategies for preventing and controlling HFMD were performed effectively. Beijing and east China played a crucial role in disseminating EV71 to other regions in China.

Indexed as

EnterovirusEnterovirus A, HumanHand, Foot and Mouth DiseaseBayes TheoremBeijingChinaHumansMolecular EpidemiologyPhylogenyRetrospective StudiesBayesian phylodynamicsEpidemiologyFoot and mouth diseaseHandHuman enterovirus 71Phylogenetics

Identifiers

PMID37924134
PMCPMC10625277

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.