Evidence map›Paper›PMID 37919811›Full record

ArticlePorcine health management2023

Spatiotemporal description of African swine fever virus nucleic acid and antibodies detected in pigs sampled at abattoirs in the greater Kampala metropolitan area, Uganda from May 2021 through June 2022.

Rodney Okwasiimire, Edrine B Kayaga, John E Ekakoro, Dickson Ndoboli, Kate Schumann, Bonto Faburay, Aisha Nassali, Cole Hauser, Krista Ochoa, Eddie M Wampande and 1 more

Open access · goldAbstract read
In one paragraph

Article in Porcine health management, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Detection of antibodies againstFrontiers in veterinary science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Rodney OkwasiimireCentral Diagnostic Laboratory, College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, P.O.Box 7062, Kampala, Uganda.
Edrine B KayagaCentral Diagnostic Laboratory, College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, P.O.Box 7062, Kampala, Uganda.
John E EkakoroDepartment of Public and Ecosystem Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853-6401, USA.
Dickson NdoboliCentral Diagnostic Laboratory, College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, P.O.Box 7062, Kampala, Uganda.
Kate SchumannForeign Animal Disease Diagnostic Laboratory, Veterinary Services, Animal and Plant Health Inspection Services, United States Department of Agriculture, National Veterinary Services Laboratories, Greenport, NY, USA.
Bonto FaburayForeign Animal Disease Diagnostic Laboratory, Veterinary Services, Animal and Plant Health Inspection Services, United States Department of Agriculture, National Veterinary Services Laboratories, Greenport, NY, USA.
Aisha NassaliCentral Diagnostic Laboratory, College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, P.O.Box 7062, Kampala, Uganda.
Cole HauserDepartment of Public and Ecosystem Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853-6401, USA.
Krista OchoaDepartment of Public and Ecosystem Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853-6401, USA.
Eddie M WampandeCentral Diagnostic Laboratory, College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, P.O.Box 7062, Kampala, Uganda.
Karyn A HavasDepartment of Public and Ecosystem Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853-6401, USA. kah47@cornell.edu.
Makerere University · UGCornell University · USAnimal and Plant Health Inspection Service · USUnited States Department of Agriculture · US

Funding

Department of the Defense, Defense Threat Reduction Agency HDTRA1-20-1-0007
6 · The paper itself

Abstract

backgroundAfrican swine fever virus (ASFV) infections in Africa cause hemorrhagic disease in domestic pigs and is maintained by a sylvatic cycle in warthogs. It is endemic in Uganda, leading to significant economic losses. Previous studies performed in rural areas and in Kampala had differing diagnostic results. The purpose of this study was to provide a robust spatial, temporal, and diagnostic summary of pigs slaughtered in the greater Kampala metropolitan area over the course of one year. This study characterized 1208 to 1323 serum, blood, and tissue samples collected from pigs at six abattoirs in the greater Kampala metropolitan area of Uganda monthly from May 2021 through June 2022. Validated and standardized serologic and molecular diagnostics were used.

resultsOnly 0.15% of pigs had detectable antibodies against ASFV, suggesting low survival rates or pre-clinical diagnosis. Yet, 59.5% of pigs were positive for ASFV DNA. Blood had the lowest detection rate (15.3%) while tonsil and lymph nodes had the highest (38% and 37.5%, respectively), spleen samples (31.5%) were in between. Agreement between sample types was fair to moderate overall. A significant seasonality of ASFV infections emerged with infections found predominately in the dry seasons. Spatial assessments revealed that the greater Kampala metropolitan area abattoirs have a catchment area that overlaps with Uganda's most pig dense regions.

conclusionsPigs at greater Kampala metropolitan area abattoirs can be sentinels for acute disease throughout the pig dense region of Uganda, particularly in the dry seasons. The high prevalence detected suggests that pigs are sold in response to local reports of ASFV infections (panic sales). Serological surveillance is not useful, as very few pigs seroconverted in this study prior to slaughter. In contrast, tissue samples of pigs can be used to detect disease using qPCR methods.

Indexed as

African swine FeverELISAqPCRUganda

Identifiers

PMID37919811
PMCPMC10623799
OpenAlexW4388221909

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.