Evidence map›Paper›PMID 37919661›Full record

ArticleBMC genomics2023

Transcriptome analysis of the Bactrian camel (Camelus bactrianus) reveals candidate genes affecting milk production traits.

Huaibing Yao, Zhihua Dou, Zhongkai Zhao, Xiaorui Liang, Haitao Yue, Wanpeng Ma, Zhanqiang Su, Yuzhuo Wang, Zelin Hao, Hui Yan and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 10 citations in OpenAlex.

  1. Type A and DFrontiers in cellular and infection microbiology · 2026
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  6. Review
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  8. Whole-Genome Resequencing Analysis of theInternational journal of molecular sciences · 2024
    Article
  9. Article
  10. Review
  11. Molecular characterization ofFrontiers in veterinary science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Huaibing Yao *Key Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China.ORCID http://orcid.org/0000-0001-6294-2712
Zhihua Dou *Key Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China.ORCID http://orcid.org/0000-0001-7500-9673
Zhongkai ZhaoKey Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China.ORCID http://orcid.org/0000-0002-5392-6769
Xiaorui LiangKey Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China.
Haitao YueKey Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China.
Wanpeng MaCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
Zhanqiang SuCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
Yuzhuo WangXinjiang Altai Regional Animal Husbandry Veterinary Station, Altay, 836500, Xinjiang, China.
Zelin HaoKey Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China.
Hui YanKey Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China.
Zhuangyuan WuXinjiang Altai Regional Animal Husbandry Veterinary Station, Altay, 836500, Xinjiang, China.
Liang WangXinjiang Camel Industry Engineering Technology Research Center, Urumqi, 830017, China.
Gangliang ChenXinjiang Camel Industry Engineering Technology Research Center, Urumqi, 830017, China.
Jie YangKey Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, 777 Huarui Street, Urumqi, 830017, Xinjiang, PR China. yangjie234@xju.edu.cn.ORCID http://orcid.org/0000-0002-9287-2142
Xinjiang Industry Technical College · CNXinjiang Agricultural University · CN

Funding

the Key Technology Research and Development Program in Xinjiang Uygur Autonomous Region 2018B01003the National Key Research and Development Projects of China 2019YFC1606103the Postgraduate Scientific Research Innovation Program of Xinjiang Uygur Autonomous Region XJ2019G026
6 · The paper itself

Abstract

backgroundMilk production traits are complex traits with vital economic importance in the camel industry. However, the genetic mechanisms regulating milk production traits in camels remain poorly understood. Therefore, we aimed to identify candidate genes and metabolic pathways that affect milk production traits in Bactrian camels.

methodsWe classified camels (fourth parity) as low- or high-yield, examined pregnant camels using B-mode ultrasonography, observed the microscopic changes in the mammary gland using hematoxylin and eosin (HE) staining, and used RNA sequencing to identify differentially expressed genes (DEGs) and pathways.

resultsThe average standard milk yield over the 300 days during parity was recorded as 470.18 ± 9.75 and 978.34 ± 3.80 kg in low- and high-performance camels, respectively. Nine female Junggar Bactrian camels were subjected to transcriptome sequencing, and 609 and 393 DEGs were identified in the low-yield vs. high-yield (WDL vs. WGH) and pregnancy versus colostrum period (RSQ vs. CRQ) comparison groups, respectively. The DEGs were compared with genes associated with milk production traits in the Animal Quantitative Trait Loci database and in Alashan Bactrian camels, and 65 and 46 overlapping candidate genes were obtained, respectively. Functional enrichment and protein-protein interaction network analyses of the DEGs and candidate genes were conducted. After comparing our results with those of other livestock studies, we identified 16 signaling pathways and 27 core candidate genes associated with maternal parturition, estrogen regulation, initiation of lactation, and milk production traits. The pathways suggest that emerged milk production involves the regulation of multiple complex metabolic and cellular developmental processes in camels. Finally, the RNA sequencing results were validated using quantitative real-time PCR; the 15 selected genes exhibited consistent expression changes.

conclusionsThis study identified DEGs and metabolic pathways affecting maternal parturition and milk production traits. The results provides a theoretical foundation for further research on the molecular mechanism of genes related to milk production traits in camels. Furthermore, these findings will help improve breeding strategies to achieve the desired milk yield in camels.

Indexed as

CamelusMilkAnimalsFemaleGene Expression ProfilingLactationParturitionPregnancyBactrian camelDiagnosis of pregnancyMilk production traitsMilk-related genesRNA sequencing

Identifiers

PMID37919661
PMCPMC10621195
OpenAlexW4388231851

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.