Evidence map›Paper›PMID 37919524›Full record

ArticleNature immunology2023

SARS-CoV-2 viral persistence in lung alveolar macrophages is controlled by IFN-γ and NK cells.

Nicolas Huot, Cyril Planchais, Pierre Rosenbaum, Vanessa Contreras, Beatrice Jacquelin, Caroline Petitdemange, Marie Lazzerini, Emma Beaumont, Aurelio Orta-Resendiz, Félix A Rey and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Nature immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it, 70 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Nicolas HuotInstitut Pasteur, Université Paris-Cité, HIV, Inflammation and Persistence Unit, Paris, France. nicolas.huot@pasteur.fr.ORCID 0000-0001-5982-7991
Cyril PlanchaisInstitut Pasteur, Université Paris Cité, INSERM U1222, Humoral Immunology Unit, Paris, France.
Pierre RosenbaumInstitut Pasteur, Université Paris Cité, INSERM U1222, Humoral Immunology Unit, Paris, France.
Vanessa ContrerasUniversité Paris-Saclay, INSERM, CEA, Immunologie des Maladies Virales, Auto-Immunes, Hématologiques et Bactériennes (IMVA-HB/IDMIT/UMR1184), Fontenay-aux-Roses & Kremlin Bicêtre, France.
Beatrice JacquelinInstitut Pasteur, Université Paris-Cité, HIV, Inflammation and Persistence Unit, Paris, France.ORCID 0000-0002-1896-5092
Caroline PetitdemangeInstitut Pasteur, Université Paris-Cité, HIV, Inflammation and Persistence Unit, Paris, France.
Marie LazzeriniInstitut Pasteur, Université Paris-Cité, HIV, Inflammation and Persistence Unit, Paris, France.
Emma BeaumontInstitut Pasteur, Université Paris-Cité, HIV, Inflammation and Persistence Unit, Paris, France.
Aurelio Orta-ResendizInstitut Pasteur, Université Paris-Cité, HIV, Inflammation and Persistence Unit, Paris, France.
Félix A ReyInstitut Pasteur, Université Paris-Cité, Structural Virology Unit, CNRS UMR3569, Paris, France.ORCID 0000-0002-9953-7988
R Keith ReevesCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-3157-2557
Roger Le GrandUniversité Paris-Saclay, INSERM, CEA, Immunologie des Maladies Virales, Auto-Immunes, Hématologiques et Bactériennes (IMVA-HB/IDMIT/UMR1184), Fontenay-aux-Roses & Kremlin Bicêtre, France.ORCID 0000-0002-4928-4484
Hugo MouquetInstitut Pasteur, Université Paris Cité, INSERM U1222, Humoral Immunology Unit, Paris, France.
Michaela Müller-TrutwinInstitut Pasteur, Université Paris-Cité, HIV, Inflammation and Persistence Unit, Paris, France.
Institut Pasteur · FRInserm · FRBeth Israel Deaconess Medical Center · USCentre National de la Recherche Scientifique · FR

Funding

Mechanisms of Natural Killer Cell Clearance of SIV from Lymphoid FolliclesR01AI143457 · NIAID · DUKE UNIVERSITY · PI REEVES, ROGER KEITH · 2019 to 2023
$3.1M
NK cell mobilization as a pathogenic etiology of SARS-CoV-2 gastrointestinal diseaseR01DK130472 · NIDDK · DUKE UNIVERSITY · PI REEVES, ROGER KEITH · 2021 to 2023
$1.2M
NIAID NIH HHS R01 AI143457NIDDK NIH HHS R01 DK130472
6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA generally becomes undetectable in upper airways after a few days or weeks postinfection. Here we used a model of viral infection in macaques to address whether SARS-CoV-2 persists in the body and which mechanisms regulate its persistence. Replication-competent virus was detected in bronchioalveolar lavage (BAL) macrophages beyond 6 months postinfection. Viral propagation in BAL macrophages occurred from cell to cell and was inhibited by interferon-γ (IFN-γ). IFN-γ production was strongest in BAL NKG2r

Indexed as

COVID-19Interferon-gammaAnimalsCD8-Positive T-LymphocytesKiller Cells, NaturalLungMacacaMacrophages, AlveolarSARS-CoV-2Interferon-gamma

Identifiers

PMID37919524
PMCPMC10681903
OpenAlexW4388217033

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.