Evidence map›Paper›PMID 37918895›Full record

ArticleAnnals of the rheumatic diseases2024

Ultra-rare genetic variation in relapsing polychondritis: a whole-exome sequencing study.

Yiming Luo, Marcela A Ferrada, Keith A Sikora, Cameron Rankin, Hugh D Alessi, Daniel L Kastner, Zuoming Deng, Mengqi Zhang, Peter A Merkel, Virginia B Kraus and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Annals of the rheumatic diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Yiming LuoDivision of Rheumatology, Department of Medicine, Columbia University Irving Medical Center, New York, New York, USA.ORCID http://orcid.org/0000-0001-7710-2425
Marcela A FerradaVasculitis Translational Research Program, Systemic Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland, USA.ORCID http://orcid.org/0000-0003-3256-3273
Keith A SikoraPediatric Translational Research Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Cameron RankinVasculitis Translational Research Program, Systemic Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Hugh D AlessiVasculitis Translational Research Program, Systemic Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Daniel L KastnerMetabolic, Cardiovascular and Inflammatory Disease Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.ORCID http://orcid.org/0000-0001-7188-4550
Zuoming DengBiodata Mining and Discovery Section, Office of Science and Technology, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Mengqi ZhangBiostatistics and Research Decision Sciences, Merck & Co., Inc, Rahway, New Jersey, USA.
Peter A MerkelDivision of Rheumatology, Department of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania, USA.
Virginia B KrausDivision of Rheumatology, Department of Medicine, Duke University School of Medicine, Durham, North Carolina, USA.ORCID http://orcid.org/0000-0001-8173-8258
Andrew S AllenDivision of Integrative Genomics, Department of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, North Carolina, USA.
Peter C GraysonVasculitis Translational Research Program, Systemic Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland, USA peter.grayson@nih.gov.ORCID http://orcid.org/0000-0002-8269-9438
National Institutes of Health · USDuke University · USDecision Sciences (United States) · USUniversity of Pennsylvania · US

Funding

Genetic Analysis of Complex Inflammatory DisordersZIAHG200371 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI KASTNER, DANIEL · 2011 to 2024
$18.8M
Vasculitis and Translational MedicineZIAAR041204 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI GRAYSON, PETER · 2015 to 2025
$15.4M
Applying Bioinformatics to Research in Immune, Muscle, and Bone DiseasesZICAR041173 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI SUN, HONG-WEI · 2021 to 2025
$10.3M
Intramural NIH HHS ZIA AR041204
6 · The paper itself

Abstract

objectiveRelapsing polychondritis (RP) is a systemic inflammatory disease of unknown aetiology. The objective of this study was to examine the contribution of rare genetic variations to RP.

methodsWe performed a case-control exome-wide rare variant association analysis that included 66 unrelated European American cases with RP and 2923 healthy controls (HC). Gene-level collapsing analysis was performed using Firth's logistics regression. Exploratory pathway analysis was performed using three different methods: Gene Set Enrichment Analysis, sequence kernel association test and higher criticism test. Plasma DCBLD2 levels were measured in patients with RP and HC using ELISA.

resultsIn the collapsing analysis, RP was associated with a significantly higher burden of ultra-rare damaging variants in the

conclusionsThis study identified specific rare variants in the

Indexed as

Genetic VariationPolychondritis, RelapsingExomeExome SequencingGenetic Predisposition to DiseaseHumansEpidemiologyExome SequencingSystemic vasculitis

Identifiers

PMID37918895
PMCPMC12248234
OpenAlexW4388215873

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.